Acaryochloris marina: AM1_1702
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Entry
AM1_1702 CDS
T00617
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
amr
Acaryochloris marina
Pathway
amr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM1_1702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amr03019
]
AM1_1702
03009 Ribosome biogenesis [BR:
amr03009
]
AM1_1702
Enzymes [BR:
amr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AM1_1702
Messenger RNA biogenesis [BR:
amr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AM1_1702
Ribosome biogenesis [BR:
amr03009
]
Prokaryotic type
rRNA helicases
AM1_1702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABW26723
UniProt:
B0CB84
LinkDB
All DBs
Position
1682041..1683456
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AA seq
471 aa
AA seq
DB search
MTLTFSQLGLSQTRVDCLEALGFTTPTQIQAEAIPHLLAGRDIIGQAQTGTGKTAAFSLP
ILEQLDPTVKTPQALILTPTRELAVQVSEAVYQFKADGALRVVAIYGGQSIDRQISQLRR
GAQLIVGTPGRVLDLLSRGEIILDQLSWFVLDEADEMLNMGFIPDVRKILERVPGDRKTA
FFSATMAPEIYKLSKQFLNDPVTVTVEQPKAAPTRINQVAYRIPRTWARSTVLQAVLELE
DPESAIIFVRTRREAATLTQQLQTAGYSADEYHGDLSQSQRERLLDRFRQRRIRWVVATD
IAARGLHVDDLSHVINYEPPDSVESYVHRIGRTGRAGNEGTAISLVHALDRWKLHEIEKH
IRQEIPTLPTPTRSAIEGRRLEKLTEELHSILTGERLASFLPTVSQLGEDYDTQTIAAAA
LQMAFDRYPAITANLDDWSSKNKNGGRSSRKAKPVLNKRRSSNRSEISAST
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacccttacgtttagtcaacttggtctttcacaaactcgtgttgattgtttagaagcg
cttggttttaccacccctactcaaattcaagcagaagccattccccacttgctagctggc
cgcgacattatcggccaagcccaaacgggaaccggtaaaacagccgctttctcacttccc
atcctagagcagctggatccaacggttaaaacccctcaagctctgattttgacaccgact
cgggagttagccgttcaagtcagcgaagccgtttaccaattcaaagcagatggtgccctg
cgggtcgtcgcgatttatggcggtcaatccatcgatcgacaaatttctcaactccgtcgt
ggcgcacagctaattgtcggtacccctggccgagttttagatttactcagtcgtggcgaa
atcatcctggaccagctcagctggtttgtcctcgacgaagcggacgaaatgctgaacatg
ggctttatccccgatgtcagaaagattttagagcgggttcctggcgatcgcaaaacagcc
tttttctctgccaccatggccccagagatttacaagctatcaaaacagtttctgaatgat
cccgttactgttactgttgagcaaccgaaagccgccccgactcgaattaatcaagtggcc
tatcggattcctcgaacatgggcgcgttctacggtcttacaggcagttctagaattggaa
gatcctgaatcagctattattttcgtccgcactcgccgggaagccgctaccctcactcag
cagctacaaaccgcaggctacagcgccgatgaatatcacggtgacctcagccaaagccaa
cgagagcgattgttagatcgattccgccaacgacgcatccgctgggtggtggcaacagat
attgccgcccgtggattacacgttgacgatctgagccacgtgatcaactatgagccaccc
gatagtgtcgaaagttacgttcaccgcattggtcggaccggacgtgcaggcaacgaaggg
accgccatttccttggttcatgccctcgatcgctggaaactgcatgaaattgagaagcat
attcggcaagaaattccgacattgcccactccaacccgctcagccattgaaggacggcgg
ttagaaaaactaaccgaagagctacacagtatcctaacgggagagcgtttggcttctttc
ttgcccactgtttctcaactgggtgaagactacgatactcaaaccatcgctgcagctgcg
ctgcaaatggccttcgatcgctatcctgccattacggccaaccttgatgactggtcttct
aagaataagaatggtggccgcagtagccggaaagccaagccagtactgaacaagcggcgt
agctctaaccgttctgagatctctgcctctacttaa
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