Pelagerythrobacter marensis: AM2010_1556
Help
Entry
AM2010_1556 CDS
T03951
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM2010_1556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amx03019
]
AM2010_1556
03016 Transfer RNA biogenesis [BR:
amx03016
]
AM2010_1556
Enzymes [BR:
amx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AM2010_1556
Messenger RNA biogenesis [BR:
amx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AM2010_1556
Transfer RNA biogenesis [BR:
amx03016
]
Prokaryotic type
tRNA degradation factors
AM2010_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
BioW
S1_2
FliG_C
Motif
Other DBs
NCBI-ProteinID:
AKM07626
UniProt:
A0A0G3XAI0
LinkDB
All DBs
Position
complement(1627185..1629476)
Genome browser
AA seq
763 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDIVAMIAASAALTISGVPFMGPIGAARVGFRNGEYELNPSLDSALDEEGRLDLV
VAATQDAVMMVESEAKELTEEEMLGAVMFAHEESRKVIGAIVDLAEQAAKDPWEIDTSDD
TSAIKEKLRGIVGDDIAAAYKLTDKSARSDALNDARAKAKEAFAEEEAQTQMVANKAVKK
LEAEIVRGAILKDGQRIDGRKLDQVRPIEAMVGLLPRTHGSALFTRGETQAICTTTLGTK
DAEQMIDGLEGLSYNHFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAWRALHPVLPAHE
DFPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPIERPVSGIAMGLILEGDDFAVLS
DILGDEDHLGDMDFKVAGSEAGITSLQMDIKVAGITQEIMTKALEQAKAGRAHILGEMTK
ALSGARGEVSKHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISS
SNADEIEAAKNWILGIVEEPEVGKVYEGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPPREPRGDRGDRGGR
GGDRRGGRGGRGGGGGGDRGPRRDRDGGGEGGGESHVPDFLKD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
ggccgcattgcccgtcaggctgacggcgcggtcctcgccacttatggcgaaaccgtggtg
ctgtgcgcagttaccgctgccaagagcgtccgcgaagggcaggacttcttcccgctgacc
gtgcactaccaggaaaaattctccgccgcgggccgcatccccggcggcttcttcaagcgc
gaaggccgcgcgacggagaaggaaacgctcacctcgcgcctcatcgaccgcccggtgcgg
ccgctcttccccgagggcttctacaacgaaatcaacgtcatcgcgcaggtcctctcgtat
gacggcgagaccgagcccgatatcgtcgcgatgatcgccgcttcggctgcgctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcacgcgtcggtttccgcaatggcgaa
tacgaactcaacccgagcctcgacagcgcgctcgacgaagaaggtcgcctcgacctcgtc
gttgccgcaacgcaggacgcggtgatgatggtcgaatccgaagccaaggaactgaccgaa
gaggaaatgctcggcgccgtcatgttcgcgcatgaggaaagccgcaaggtcatcggcgcg
atcgtcgacctggccgagcaggccgccaaggatccgtgggaaatcgacacttcggacgac
acctcggcgatcaaggaaaagctgcgcggcatcgtcggcgacgacatcgccgccgcttac
aagctgaccgacaagtcggcgcgttcggatgcgctcaacgatgcgcgggccaaggccaag
gaagccttcgccgaagaagaagcgcagacgcagatggtcgccaacaaggcggtcaagaag
ctggaagcggaaatcgttcgcggcgccatcctcaaggacggccagcggatcgacggccgc
aagctggaccaggtccgcccgatcgaggcgatggtcggcctgctgccccgcacgcatggt
tcggcgctgttcacgcgcggtgaaacgcaggcgatctgcaccaccacgctgggcaccaag
gatgccgagcagatgatcgacgggctcgaaggcctgtcgtacaatcacttcatgctgcac
tataacttcccgccctattcggtcggtgaagtgggtcgcttcggcttcaccagccgccgc
gaaaccggtcacggcaagctcgcatggcgcgcgctgcacccggtgctgcccgcgcatgaa
gatttcccctacaccatccgcatcctgtcggacatcaccgagtccaacggctcgtcctcg
atggcgaccgtctgcggtggctgtctgtcgatgatggacgccggcgttccgatcgaacgt
ccggtgtcgggcatcgcgatgggcctgatcctcgaaggcgacgacttcgccgtcctgtcg
gacatcctgggtgacgaagatcacctgggcgacatggatttcaaggtggcaggctccgaa
gcgggcatcacctcgctccagatggacatcaaggttgccggcatcacgcaggaaatcatg
accaaggcgcttgagcaggcgaaggccggccgcgcgcacatcctgggcgaaatgaccaag
gcgctttcgggcgctcgcggtgaagtttccaagcacgctccgcgtatcgaaacgatgcag
atcgacaagtcgaagatccgcgacgtcatcggcacgggcggcaaggtgatccgcgagatc
gtcgccgaaacgggtgccaaggtcgacatcgacgacgagggcgtgatcaagatcagctcc
tccaacgccgacgagatcgaagctgccaagaactggatcctcggcattgtcgaagaaccg
gaagtgggcaaggtctacgaaggcaaagtcgtcaacatcgtcgatttcggcgctttcgtg
aacttcatgggcggcaaggacggtctcgtccacgtttccgaaatgaagaacgagcgcgtg
gagaagccgaccgacgtcgtgtccgaagggcaggaagtgaaggtcaaggttctcgagatc
gacaatcgcggcaaagtccgtctgtcgatgcgcgtcgtcgatcaggaaaccggcgaggag
ctggaggatacccgtcctccgcgcgaaccgcgtggtgatcgcggcgaccgtggcggccgt
ggcggtgatcgccgcggtggacgtggcggtcgcggcggcggcggcggcggtgatcgcggc
ccgcgccgtgatcgtgacggcggcggcgagggcggcggcgaaagccacgtccccgacttc
ctgaaagactag
DBGET
integrated database retrieval system
