Amylibacter sp. IMCC11727: QBD29_12550
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Entry
QBD29_12550 CDS
T08989
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
amyl
Amylibacter sp. IMCC11727
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyl03009
]
QBD29_12550
Enzymes [BR:
amyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
QBD29_12550
Ribosome biogenesis [BR:
amyl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QBD29_12550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WGI20937
LinkDB
All DBs
Position
complement(2477721..2478758)
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AA seq
345 aa
AA seq
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MSDTNDILVLTLGATPPARLDKALAEVVPEGVSLSRSRLGKLIEGGAVTRLSDGAVVTKM
KTQGIEGEEWQVAIPVAVALEAEPQNIPIEIVYEDDDLIVVNKAAGMVVHPAPGSEDGTL
VNALLYHCADSLSGVGGAKRPGIVHRIDKDTSGLLVVAKTDAAHQGLAAQFADHSIDRVY
VAFCITAPSAADPRLRGLPGVAFETGGVLRIATNIERHKTDRKRMAVAANSGRHAITRAR
VIEDFGGRAARMECWLETGRTHQIRVHMSHVGHGLIGDPIYGTRRRVKVAGLDEVDARVI
TDFDRQALHAAKLGFIHPISGEPVAFESDLPNDLKMLEMALSKLK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccaatgatatccttgtgctgacccttggcgccactccgcctgcgcggctt
gataaagcactggcagaggttgtgccagagggtgtgagcctgagccgctcccgtttgggc
aaattgatcgaaggcggggcggtgacgcgcctgtctgatggtgcggttgtgaccaagatg
aaaacccaagggatcgagggcgaagaatggcaggtggccattcccgttgccgtggccttg
gaggcagagccgcaaaacattccgattgagattgtgtatgaagatgatgatctgattgtg
gtgaacaaagccgcgggcatggtggtacatcctgcacctggttccgaagatggcacgttg
gtgaatgcactgttgtatcactgcgccgatagcctgtctggagtaggcggtgcgaagcga
ccaggcattgtgcatcggattgataaagacacaagcggattgctggttgttgccaaaaca
gacgcagcccatcagggactggccgcgcaatttgcagatcattccattgatcgtgtgtat
gttgccttttgtattacggccccatccgcggcggacccgcggttgcgcggtctgcctggc
gttgcctttgaaacgggaggcgtgttgcggattgccacgaacattgaacgtcataaaacg
gatcgtaagcgcatggccgttgcggccaattctgggcgtcatgcaatcacccgtgcgcgc
gtgattgaggatttcggaggccgtgcggcgcggatggagtgctggcttgaaacagggcgc
acccatcaaattcgtgttcacatgtcccacgttgggcatggtctgatcggagacccgatt
tatggcacgcgacgccgtgtcaaagtggcgggattggacgaagttgacgcaagggtaatc
acagattttgatcgtcaggccctccatgcggcgaaactgggatttattcatccaatttcg
ggagagcctgtcgcgtttgaaagcgatttacccaatgatttaaagatgttagagatggct
ttgtcaaaattgaaatga
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