Malaciobacter mytili: AMYT_1471
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Entry
AMYT_1471 CDS
T05895
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
amyt
Malaciobacter mytili
Pathway
amyt03030
DNA replication
amyt03430
Mismatch repair
amyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMYT_1471 (holB)
03430 Mismatch repair
AMYT_1471 (holB)
03440 Homologous recombination
AMYT_1471 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyt03032
]
AMYT_1471 (holB)
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_1471 (holB)
Enzymes [BR:
amyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMYT_1471 (holB)
DNA replication proteins [BR:
amyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMYT_1471 (holB)
DNA repair and recombination proteins [BR:
amyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMYT_1471 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Pneumovirus_M2
Motif
Other DBs
NCBI-ProteinID:
AXH15047
UniProt:
A0A345J5G3
LinkDB
All DBs
Position
complement(1450319..1450951)
Genome browser
AA seq
210 aa
AA seq
DB search
MIDIKIDSSIILIVNSVEDTISYLISTLPTHSTRVIKNEEKDEFLIAQANAAIKEAYIAS
NNKKYIILCGTTFRSEAQNSLLKVLEEPPKNIVFIIVTTTKSTILPTIFSRLPHKYLKKS
TISIASNLDILRLDLKDIYNFLKDNQKITKQEAKVLVESILLKVNEQKIKLTRKELEMFS
DCIKLIDLNSRPINVLTTLLLTLNHRKNRF
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgattgatataaaaatagattcatcgattattttaattgttaatagtgttgaagatact
ataagctatcttatttcaactttacccactcattcaacaagggtaattaaaaatgaagaa
aaagatgaatttttaattgcacaagcaaatgcagcaattaaagaggcttatattgcttca
aataataaaaaatatattattttatgtggtactacttttagaagtgaagcacaaaactca
ttattaaaagttttagaagaaccccctaaaaatatagtttttattattgtaactacaaca
aaatctactattttacctactatattttcaagactacctcataaatatctaaaaaaatct
acaataagtattgctagtaatttagatatattaagacttgatttaaaagatatttataat
tttttaaaagataatcaaaaaatcacaaaacaagaggcaaaagtattagttgaatcaata
ctattaaaagtaaatgaacaaaaaatcaaattaacaagaaaagaattagaaatgttttct
gattgcataaaattaattgatttaaattcaagacctataaatgtattaactaccctactt
cttacgctaaatcatagaaaaaataggttttaa
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