Amycolatopsis sp. YIM 10: YIM_09415
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Entry
YIM_09415 CDS
T06270
Name
(GenBank) anaerobic benzoate catabolism transcriptional regulator
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_09415
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
XRE family
YIM_09415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_31
HTH_3
HTH_19
HTH_26
HTH_25
HTH_24
HTH_37
MarR
Motif
Other DBs
NCBI-ProteinID:
QFU87091
UniProt:
A0A5P9PFM3
LinkDB
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Position
complement(1891066..1892490)
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AA seq
474 aa
AA seq
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MDKTFAGAKLRHLRETRSMSQADLARLLEISPSYLNQIEHNARPLTVPVLFRITQAFGVD
AEFFANNDTARLVADVREALLDESLGVQATTGEINELATNLPSIAQALVRLHRRYRDAVE
NTAALVTEDGSGVHGSAAGPLPHEEVRDFFYERENYVAELDERAERMAAELPLRRGEVLS
SLRDRLTERYGVHVTSEGIDETVGEQHRYEPHARVLRMAPSLRVGQQAFRMASQIALLEY
DDLIAELADSWAFSGPAARSLARVGLANYFAGALILPYEQFYRRAEEYRYDIERLCDHFG
VGFETACHRLSTLQRPKMRGVPFSFVRVDRAGNMSKRQSAAGFHFSRVGGACPLWNIYEA
FTSPGKILTQIASLPDGKSYFWIARTISRNIGGYGSPGKMFTVGLGCELRHARRLVYSTG
LDLDDRAAATPIGMGCKVCERPACPQRAFPTIGKQLTVDENTSTFVPYPAVPKP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagaccttcgccggcgcgaagctgcgccacctgcgtgagacccgctcgatgagc
caggcggacctcgcccggctgctggaaatctcgccgagctacctcaaccagatcgagcac
aacgcccgtccgctgaccgttccggtgctcttccggatcacccaggccttcggcgtggac
gccgagttcttcgcgaacaacgacaccgcgcgcctggtcgccgacgtgcgcgaagccctg
ctcgacgagtcgctcggcgtgcaggcgaccaccggcgagatcaacgagctggcgacgaac
ctgccgtccatcgcccaggcgctggtccggttgcaccggcggtaccgggacgcggtggag
aacaccgccgcgctggtgaccgaggacggcagcggggtgcacggcagcgcggccgggccg
ttgccgcacgaggaggtgcgcgacttcttctacgaacgcgagaactacgtcgccgagctg
gacgaacgcgccgagcggatggccgccgaactgccgctgcgccggggtgaggtgctgtcc
tcgctgcgggaccggttgaccgagcgctacggggtgcacgtcaccagcgagggcatcgac
gagacggtcggcgagcagcaccggtacgagccgcacgcgcgggtgctgcgaatggcgccg
agcctgcgggtcgggcagcaggccttccggatggcttcgcagatcgcgctgctggagtac
gacgacctgatcgccgagctggccgattcgtgggcgttctccggtccggccgcgcgttcg
ctggcgcgggtcgggctggccaactacttcgccggggcgctgatcctgccgtacgagcag
ttctaccggcgagccgaggagtaccggtacgacatcgagcggctgtgcgaccacttcggg
gtgggcttcgagacggcgtgccaccggctgtccaccctgcaacggccgaagatgcgcggg
gtgccgttctcgttcgtgcgggtggaccgcgcgggcaacatgtcgaagcggcagtcggcg
gcgggcttccacttctcgcgggtgggcggggcgtgcccgctgtggaacatctacgaggcg
ttcacgtcgccgggcaagatcctgacgcagatcgcgtcgctgccggacggcaagagctac
ttctggatcgcacggacgatctcgcggaacatcggcggctacggctcgcccggaaagatg
ttcaccgtcggcctcggctgtgaactccgccacgcgcggcggctggtctactcgaccggc
ctcgacctggacgaccgggccgccgccaccccgatcggcatgggctgcaaggtctgcgaa
cgcccggcctgcccgcaacgcgccttcccgaccatcggcaagcagctgaccgtcgacgag
aacacgagcaccttcgtgccgtatccggccgtgccgaagccgtga
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