Amycolatopsis sp. YIM 10: YIM_10385
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Entry
YIM_10385 CDS
T06270
Symbol
pcaH
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00362
Benzoate degradation
amyy01100
Metabolic pathways
amyy01120
Microbial metabolism in diverse environments
amyy01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
YIM_10385 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
YIM_10385 (pcaH)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
YIM_10385 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QFU87282
UniProt:
A0A5P9PGR2
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Position
2081310..2082026
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AA seq
238 aa
AA seq
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MSLPTYRPDPEGTHPPLGFPGYRSTALRHPKLPLVLLPQMLTEVTGPLLGPGRLGEHDND
LTRQHAGEPQGQRIVVHGRLLDGDGRPVRNSLVEVWQANAGGRYRHTGDRWPSPIDPNFD
GVGRTLTDDNGHYEFTTIKPGAYPWKNHDNAWRPAHIHFSVFGTSFTQRLVTQMYFPEDP
LFAQDPIFNSIPDEKARMRMVSRFDLERTQPEWALAYEFDIVLRGRDASVFEDEEDDE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccacctaccggccggatcccgaaggcacgcacccgccgctcggcttcccc
gggtaccgctcgaccgcgctgcggcacccgaagctgccgctggtgctgctgccgcagatg
ctcaccgaggtgaccggcccgctgctcggaccgggcaggctcggcgagcacgacaacgac
ctgacccggcagcacgccggtgagccgcagggccagcggatcgtcgtgcacgggcgcctg
ctcgacggcgacggccgcccggtgcggaactcgctggtcgaggtctggcaggccaacgcg
ggcggccggtaccggcacaccggcgaccgctggccgtcgccgatcgacccgaacttcgac
ggtgtcgggcgcacgctcaccgacgacaacgggcactacgagttcaccaccatcaagccc
ggcgcctacccgtggaagaaccacgacaacgcctggcggccggcgcacatccacttctcg
gtgttcggcacctcgttcacccagcgcctggtcacccagatgtacttcccggaggacccg
ctcttcgcccaggacccgatcttcaactcgatcccggacgagaaggcgcggatgcgcatg
gtctcccgcttcgacctggagcgcacgcagccggaatgggcgctggcctacgagttcgac
atcgtgctgcgcggccgtgacgcctcggtgttcgaggacgaggaggacgacgaatga
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