Aminobacter niigataensis: AMD1_0899
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Entry
AMD1_0899 CDS
T09606
Name
(GenBank) RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anj03021
]
AMD1_0899
Transcription machinery [BR:
anj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMD1_0899
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
CAI2932181
LinkDB
All DBs
Position
AMD1:complement(884686..885558)
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AA seq
290 aa
AA seq
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MNDENFLSERFAANRGHLRAVAYRMLGSASEAEDAVQETWLRLVRTGAGDIDNLGGWLTT
VVARVCLDMLRQRKSRREDPLDVEGPDEVADDAAGIDPERELAMADAVGLALLVVLERLA
PAERIAFVLHDMFDLSFDDIAPIVERTPVAARQLASRARRRVQGSDEAGAPDRTRQREVV
DAFLAASRGGDFAGLLAVLDPDVVFRADAAAARLGSAAELRGAQAVAQNFKGRAQVARPA
LVDGSIGLLIAPMGKLRVVLALKLDGDRIVGIDAIADPDRLAQLDVALLA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaaaattttctgagcgagcgatttgccgccaatcgtgggcatttgcgcgcc
gtggcctaccgcatgctgggctcggccagcgaggccgaggacgccgtgcaggagacctgg
ctgaggctggtgcggaccggcgccggcgacatcgacaatctcggcggctggctgaccact
gtcgtggcccgcgtctgcctggacatgctgcgccagcgcaaatcgcggcgcgaggatccg
ctggacgtcgaagggccggacgaggtcgccgacgatgctgccggcatcgaccccgagcgc
gagctggcgatggccgacgccgtcgggctggcgctgctggtggtgctggagaggctggcg
ccggccgagcgcatcgccttcgtgctgcacgacatgttcgacctgtctttcgacgacatt
gcgcccatcgtcgagcgcacgccggttgccgcgcggcagctggccagccgcgcccggcgg
cgcgtgcagggcagcgacgaggccggcgcacccgaccggacgcggcagcgagaggtggtg
gacgcgttccttgcggcatcgcgcggcggcgacttcgccggcctgctggccgtgctcgac
cccgacgtggtgttccgcgccgacgcggcagcggcccggctgggctcggccgccgagctg
cgcggggcgcaggcggtggcgcagaacttcaagggccgcgcccaggtcgcccgcccggca
ctggtcgacggctcgatcggcctgctgatcgcgccgatgggcaagctgcgcgtcgtgctg
gccctcaagctcgacggcgacaggatcgttggcatcgacgccatcgccgatccggatcgg
ctggcgcagctggacgtggcgctgctggcttag
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