Aminobacter niigataensis: AMD1_4636
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Entry
AMD1_4636 CDS
T09606
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anj03009
]
AMD1_4636 (rsmB)
Enzymes [BR:
anj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AMD1_4636 (rsmB)
Ribosome biogenesis [BR:
anj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AMD1_4636 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Ubie_methyltran
FtsJ
Methyltransf_25
PCMT
MTS
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
CAI2935910
LinkDB
All DBs
Position
AMD1:complement(4473942..4475228)
Genome browser
AA seq
428 aa
AA seq
DB search
MRLGGRLAAAIEVLDDIERRHRPAADALKDWGLSHRFAGAGDRAAIGNIVYDALRRKRSA
GWLLGDETSRALGFGALLLEWDQSAEALNQTLDGDKFAPEALSTAELAAIAERKLTDAPD
AVRADSPDWCAPLLERAFGTDWVEEGAALAARPPLDIRVNTLKADRDRVIAELEGTQAAP
MALAPHGVRIPPIDGSGRHPNVQAEPAFQKGWFEIQDEGSQLAAELAGATPGMQVLDFCA
GAGGKTLALSAAMENRGQIFAHDSEKSRLAPMFDRLRRSDNRNVQVVTKPSELSGLTGHM
DLVLIDAPCTGSGTWRRRPDAKWRLTQRQLDVRKAEQSAILDAASAYVKPSGLLVYITCS
VFDEENADQVDAFFQRANGFAAIDHRALWQARFPGRDDAVRLGAQGLSLTPARSGTDGFY
FAAMRRKG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttggcggaaggctggcagcagccatcgaagtactcgacgatatcgagaggcgg
catcgtcccgccgccgatgcactcaaagactggggactttcccatcgtttcgccggcgct
ggcgatcgtgcggccattggcaacatcgtttatgacgcgctgcgccgcaagcgctccgcc
ggctggctgcttggcgacgagacctcgcgcgcattgggcttcggcgcgctcctgctcgaa
tgggaccagtcggccgaagcgctcaaccagacgctcgatggcgacaagttcgcgcccgaa
gcgctgagtaccgcggagctggccgccattgccgagcgcaagctcactgatgcgcccgat
gctgtccgcgctgacagtcccgactggtgtgcgccgcttctcgaacgcgctttcggcacc
gactgggtggaggagggcgccgcccttgccgcccgtccgccgctcgacatccgtgtcaac
acgctgaaggccgaccgcgaccgcgtcatcgccgaactcgaaggcacccaggccgcgccg
atggcgctcgccccgcatggcgtgcgcatcccgccgatcgacggcagcggccgccacccc
aacgtccaggccgagccggccttccagaagggctggttcgagatccaggacgagggctcg
cagctagcggccgaacttgccggcgcaacccctggcatgcaggtgctcgacttctgcgcc
ggcgccggcggcaagacgctggcgttgtcggcggcgatggagaaccgcggccagatcttc
gcccacgattcggaaaagtcgcgccttgcgccgatgttcgatcgcctgcgccgctccgac
aaccgcaacgtccaggtcgtcaccaagccgtccgaactgtcgggcctcaccggccatatg
gatctggtgctgatcgacgcgccctgcaccggcagcggcacttggcgccgccggccagat
gccaagtggcgtcttacccagcgccagcttgatgtccgcaaggccgagcagtcggccatc
ctcgacgccgccagcgcctatgtgaagccgagcggtctcctcgtctacatcacctgctcg
gtcttcgacgaggaaaacgccgaccaggtcgacgccttttttcagcgtgccaacggcttt
gcggctatcgatcaccgcgcgctgtggcaggcccgtttccccggccgcgacgatgccgtg
cgccttggcgcgcagggcctgtcgctgacgccggccaggagcggcaccgacggcttctat
ttcgccgccatgcgccgcaagggctga
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