Arvicanthis niloticus (African grass rat): 117697740
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Entry
117697740 CDS
T08817
Symbol
Cpsf7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03015
mRNA surveillance pathway
anu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117697740 (Cpsf7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117697740 (Cpsf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117697740 (Cpsf7)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
117697740 (Cpsf7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117697740
NCBI-ProteinID:
XP_034344817
EnsemblRapid:
ENSANLG00005013109
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All DBs
Position
1:118823675..118846329
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AA seq
471 aa
AA seq
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MSEGVDLIDIYADEEFNQDSEFNNTDQIDLYDDVLTAASQPSDDRSSSTEPPPPVRQEPA
PKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASTPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggatttgattgatatatacgctgatgaagagttcaatcaggactcg
gagttcaacaatacagatcagattgacctatatgatgatgtgttgacggctgcctcacag
ccttcagatgacagaagcagtagcacagaaccaccccctcctgttcgacaggagcctgct
cccaaaccaaacaacaagacccctgcaattctgtatacatacagtggcctgcggagtcgg
cgagcggctgtctatgtaggcagcttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaaccgtgca
aatggccagtctaaagggtatgctgaagtggtggtagcctctgaaaattctgtccacaaa
ttgctggaactcttaccaggaaaagttcttaatggagaaaaagtagatgtgaggccggcc
acccggcagaacttatcacagtttgaggctcaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggaatacctccacgggcccattccagagattctagtgattctgctgacgga
cgggcaaccccctctgagaatcttgtaccctcatctgctcgtgtggataagccccccagc
gtgttgccctactttaaccgtcctccttcagcccttcccctaatgggtctgcccccaccc
ccaattccacccccaccacctctctcctcaagctttggtgtccctcctcctcctcctggt
attcactaccagcatcttatgccccctcctcctcgattacctcctcatctggctgtacct
ccccctggggccatcccaccagcccttcacctcaatccagccttcttccccccaccaaat
gctacagtggggcctccaccagatacttacatgaaggcctctacaccctataaccaccat
ggcagccgagattcaggccctccaccttctacagtgagtgaagctgaatttgaagagata
atgaagcgaaacagagcaatttccagcagtgccatttccaaagcagtgtctggagctagt
gcgggggattacagtgacgccattgagacactactcacagccattgcagttatcaaacag
tcccgagtcgccaatgatgagcgttgccgggtcctcatctcctctcttaaagactgtctt
catggcatagaagccaagtcatacagtgtgggtgccagtggaagctcttctaggaaaaga
catcggtccagggagaggtcacccagccggtcccgggaaagtagcaggaggcaccgagac
ttgcttcataatgaagaccggcatgatgattatttccaagagaggaaccgggagcatgag
cgacaccgggatagagaacgggaccggcaccactga
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