Arvicanthis niloticus (African grass rat): 117708336
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Entry
117708336 CDS
T08817
Symbol
Zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117708336 (Zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117708336 (Zcchc7)
03016 Transfer RNA biogenesis [BR:
anu03016
]
117708336 (Zcchc7)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117708336 (Zcchc7)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117708336 (Zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
117708336
NCBI-ProteinID:
XP_034357801
EnsemblRapid:
ENSANLG00005006134
LinkDB
All DBs
Position
5:complement(99372141..99557556)
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AA seq
542 aa
AA seq
DB search
MFGGYETIEAFEDDLYRDDSSSELSVDSEVEFQLYSQVHYAQNIHNANKEEGYEEKNCEN
SETESNQPNQKNLIVLSDSEVIQLSDTSEVITLSDEDSIYRCKKKNVKIQAQEKTQSSAP
HFNKVAKKCKRDNEKPEPEEKPNVIREVMIIEVSSNEEEESTISENENVESWMLLGCEED
DKDHDILLNLVGCENTGAEGEDDVNWFISDKDMEAKIDNNKSSGRWNNRYYSANKNVTCR
NCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARYCLDCSLPMSSTHRCFERSSWRK
RCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCAQKGHYGHECT
ERRMFNQTFPTSPFIYYYDSKYDIQQRDWRIKRKMKDIKKNGDFPRQFKRPHVEKTDERR
HHDMRKNHSSRKRSRWPQENKETQKEKTRSREGKTHRRDHQPQDEDEDFPRGSKPNSSGS
VNNQKPSRSRHHASHYHRLREEKFLRESKRSKPKKRKCAEDGSRDDLFLIKQRKKRPKPS
GF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggctatgagactatagaagcatttgaagatgacctttatcgtgatgattca
tctagtgaactgagtgttgatagtgaggtggaatttcagctctacagccaagtccattat
gcccagaatatacataatgccaacaaggaggaagggtatgaggaaaagaactgtgagaat
tctgaaacagagagtaatcaaccaaaccagaagaacttaatcgtcctctcagatagtgag
gtcatccagctatcagatacatcagaggttatcacattatctgatgaagatagtatttat
agatgtaaaaaaaaaaatgttaaaatccaagcgcaagaaaagacccagagttctgctcct
cattttaataaagtggctaagaaatgcaagagggataatgagaagcctgaacctgaagaa
aagccaaatgtgatcagagaggtcatgatcatagaggtcagttcaaatgaggaggaagaa
agtaccatttcagagaatgaaaatgtggagagctggatgctcctgggatgtgaggaagac
gataaagaccatgacatccttctcaacctggtgggatgtgagaacactggtgccgaagga
gaagatgatgtaaattggttcatcagtgacaaagacatggaggccaagatagataataac
aaatcatctggaaggtggaacaaccgatactattcagctaacaaaaatgtcacttgtaga
aattgtgataaacgtggccatttgtcaaaaaactgccccttaccacaaaaagtccggccc
tgctgcctctgctcggagagaggacacctccagtatggctgtccagcccgttactgctta
gactgctctttgcccatgtcttccacccacagatgttttgaaagatcttcctggagaaaa
cgatgtgaccgatgtgatatgataggccactatgctgacgcttgcccagaaatctggagg
cagtatcacctaacgaccaaacctggaccacctaaaaagccaaagaccccttctggacaa
tcagcattagtgtattgctacaactgcgcacagaaaggccattatggacatgaatgtaca
gagagacgaatgttcaaccagacgtttccaacatctccattcatatactactatgatagc
aaatacgacatccagcaaagggattggagaataaaacgaaaaatgaaagatatcaagaaa
aatggagattttccaaggcagttcaaaagaccacatgtagaaaagacagatgagaggcgc
caccacgatatgagaaaaaaccattcctcaagaaaacgcagtaggtggcctcaagaaaat
aaagaaacacagaaagaaaagaccaggagtagagaaggcaaaacgcacaggagggatcac
cagcctcaggatgaggatgaggacttccccaggggctcaaaacccaactcctctggcagc
gttaacaaccagaagccttccaggtctcgccatcatgcatcccattatcacaggctgaga
gaagagaagtttctcagagagagcaagcggagcaaaccaaagaaaaggaaatgtgcagag
gacggcagccgtgacgatttatttcttattaagcaaaggaagaagagacctaagccgagt
ggtttctga
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