Arvicanthis niloticus (African grass rat): 117708812
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Entry
117708812 CDS
T08817
Symbol
Usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117708812 (Usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117708812 (Usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117708812 (Usp1)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117708812 (Usp1)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117708812 (Usp1)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117708812 (Usp1)
Ubiquitin system [BR:
anu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117708812 (Usp1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117708812 (Usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117708812
NCBI-ProteinID:
XP_034358585
EnsemblRapid:
ENSANLG00005005299
LinkDB
All DBs
Position
5:complement(52321192..52333476)
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AA seq
783 aa
AA seq
DB search
MPGVIPSESTGLSRGSPSKKNRLSLKFFQKKETKRALDFIDSQENEEKTSEYRGSEIDQV
VPAAQSSPISCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKTGVKHLFNIISRKK
EALKDDANQKDKGSCKEDPLASYELICSLQSLIISVEQLQASFLLNPEKYPDELATQPRR
LLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQFLKKEEIKNLAELSSKAEEKALQK
EETNGINSTEIDSMRNLEDFKDQLPKGNWKRKSDSESGNMKKKVKLSRESQPLEENQRQT
RSKRKATGDTLGVSPKITPKCVSENESAKPSQNKSKVKINWLKPATKQPSILSKFCSLGK
ITTNQRSKGQSKENEGDLEEDLEKYGSDNTVNGGPESLGSIDAPVDSGEAKSVNKGAEQI
GFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTE
MKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLE
FDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT
DLNSLELDKGNFVVDQMCEIGKPEPLNEEEARGTAENYDEEVSIRVGGNAQPSKVLNKKN
VEGIGLLGGQKSKADYELYNKASSADKVVGTAFTDSRNSETNDTNGTHESDRNKESSDQT
GINMNGLENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFY
KKL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgtcatacctagtgaaagtactgggctttcaagaggcagtccatccaagaaa
aacagactgtctttgaagttttttcagaaaaaggaaactaaaagagccttagactttatt
gattctcaagaaaatgaagaaaaaacttctgaatatagaggatctgagattgatcaggtt
gttcctgctgcacagtcctcaccaataagctgtgagaagagagaaaacttgttaccattt
gttggactgaataaccttggcaatacttgttatctgaatagtattcttcaggtgttatac
ttttgtcctggttttaagactggagtgaagcacttatttaatattatttcaaggaagaaa
gaagctctgaaggatgacgctaatcagaaggataagggaagctgcaaagaagatcctttg
gcaagttatgagcttatatgcagtttacagtccttaataatttcagttgaacagcttcag
gctagttttctcttaaatccagagaaatatccggatgaacttgctacacagccaaggcga
ctgctcaacacactaagggaactcaaccctatgtatgaaggatatctacagcatgatgca
caggaagtgctacagtgtattctgggaaacattcaagaaacatgccaattcctaaaaaaa
gaagagataaaaaacttggccgaattatccagcaaggctgaagaaaaagcgcttcagaaa
gaggaaacaaatggaattaacagcacagagattgacagtatgaggaatctggaggacttt
aaagaccaactcccaaaaggaaactggaaaagaaaaagcgacagtgaatcgggtaacatg
aagaaaaaggttaaattgtccagggaatcccagccattggaagaaaaccagagacaaacc
aggtcaaaaagaaaagctactggagacacactaggggtttctcctaaaatcacccccaag
tgtgtttctgaaaatgagagtgcaaagccctcacagaataaatcaaaagttaaaatcaat
tggttaaagccggccactaagcaacccagcattctttctaagttctgtagtcttgggaaa
ataacaaccaaccagcgctccaaaggacaatctaaagaaaacgagggtgatcttgaagaa
gacttggagaagtacggaagtgacaacacagttaatggtggtcccgagtctctgggaagt
atcgatgcacctgtggacagtggtgaagctaagtccgtaaacaaaggtgccgagcagatt
ggctttgagctagtagagaaactgtttcaaggtcagctagtattaaggactcgttgtttg
gaatgtgaaagcttaacagaaagaagagaagatttccaggatattagtgttccagtacaa
gaagatgagctttccaaagtcgaggagagctctgaaatttctccagagccaaaaacagaa
atgaaaaccttgagatgggcaatttcacagtttgcttcagtggagagaattgtaggagag
gataaatatttctgtgaaaattgccatcattatacggaagcagagcgaagtctcttgttt
gataaaatgcctgaagttatcactattcatctgaagtgctttgctgctagtggcttggag
tttgattgttatggtggtggactttccaagatcaacactcctttactgacacctcttaaa
ctgtccctagaagaatggagcacaaagccgactaatgacagctatggattatttgctgtt
gtgatgcacagtggcattactatcagtagtgggcactatactgcatctgttaaagtcacc
gaccttaacagtctagaacttgataagggcaattttgtggttgaccagatgtgtgaaata
ggtaagccagagccactgaatgaggaggaagcaagggggacagctgaaaattatgatgaa
gaagtatcaattagagttggtggaaatgcccagccaagtaaagttttgaacaaaaaaaat
gtggaaggtattggacttcttggaggacaaaagagcaaagcggattatgagctgtacaac
aaagcatctagtgctgacaaggtagtcgggacagcattcactgacagtagaaattctgaa
actaatgatactaatgggacccacgaatctgacaggaacaaggaatccagtgaccaaaca
ggcattaacatgaatggacttgagaacaaaatttcctatgtagtgcaaagcttaaaggag
tatgaagggaagtggttgctttttgatgattctgaagtaaaagttacagaagagaaagac
tttctgaattctctttctccttctacatctcctacatctactccctacttgctattttat
aaaaaattatag
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