Arvicanthis niloticus (African grass rat): 117709987
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Entry
117709987 CDS
T08817
Symbol
Tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117709987 (Tsen54)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117709987 (Tsen54)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
117709987
NCBI-ProteinID:
XP_034360355
EnsemblRapid:
ENSANLG00005008822
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Position
6:complement(6637915..6645682)
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AA seq
527 aa
AA seq
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MEPEPESEPESVEVPAGRVLSASELRAARLRSQKLPQRSHGPKDFLPDGSEAQAERLRLC
RQELWQLLAEERVERLGSLVAAEWRPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEAL
YLLECGSIQLFYQDLPLSIQEAYQLLLTEDTLSFLQYQVFSHLKRLGYVVRRFQLSSVVS
PYERQLNLDGYAQCLEDGSGKRKRSSSCRSVNKKPKALQNSLPPVSLAASSPPACDQSSQ
YPEEKPRDSSPGQGSELPLQFLGSSEPCPGLAREDVGCGQENDKIENGAKGTPKLRWDFE
QISFPNMASDSRHTLLPAPAPELLPANVIGRGTDAESWCQKLNQRREKLSRRDREQQAEA
QQFREDVNADPEVQGCSSWREYKELLQRRQTQKSQPRPPHLWGQNITPLLNPDKADSPAA
VLQHISVLQTTHLADGGYRLLEKSGGLEISFDVYQADAVATFRKNNPGKPSVRMCISGFD
EPVPDLCSLKRLTYQSGDVPLIFALVDHGDISFYSFRDFTLPRDLGH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagcccgaatccgaacccgagtctgtggaggttcccgcggggcgtgtgctc
agcgcctcggagctccgcgccgcgcgcttgcggtcccagaagctgcctcagcggtctcat
ggccccaaggacttcctccccgacggctcggaggcccaggcggagcggctgcgcctgtgt
cgccaggagctgtggcagctgctggcggaggagcgcgtggagcgcctgggcagcttggtg
gccgcggagtggagaccagaagagggctttgtggagttgacgtctcctgcggggaaattc
tggcagaccatgggctattccgaggaaggacggcagcggcttcacccagaagaggccctg
tatctgctggagtgtggctcgattcagctcttctaccaagacctaccactgtctatccaa
gaggcctaccagctgctgctgaccgaggacaccttgagtttcctgcaatatcaggtcttc
agtcacctgaagagactgggctatgtggttcgtcggttccagctaagctctgtcgtgtca
ccttacgagcggcagctcaatttggatggctatgcccagtgcctggaggatgggtctggc
aagaggaaaaggagttccagttgccggtctgttaataagaagcccaaggccctgcagaat
tccctgccgcccgtcagcctggcagcctccagcccacctgcctgtgaccagagtagccag
tacccagaggagaagcctcgggactcaagccccgggcagggctcagagctccccttgcag
tttctggggtcctcagagccttgccctggtctggccagggaagatgtggggtgtggccag
gaaaatgacaagatagagaatggagccaaggggacccctaagctacgctgggactttgag
cagatctcattccccaacatggcctcagatagccgtcacaccctcctgcctgctccagcc
ccagagctgctcccggccaatgtcattgggcgagggacagatgctgagtcctggtgccag
aagctgaaccagcggagggagaagctttcccggcgagaccgggaacagcaagcagaggcc
cagcagttccgggaggacgttaacgcagatcctgaggtgcagggctgctccagctggcgg
gagtacaaggagctgctgcagaggcgacagacgcagaagagccagcccaggcctccacac
ctatggggccagaacattacccccttgctcaacccggataaagctgattctccagccgcg
gtcctgcaacatatctctgtactgcagacaacacaccttgctgatggaggttaccggctg
ctggagaagtctgggggcttggagatcagcttcgatgtttatcaggctgacgctgtggct
acgttccggaaaaacaaccctggcaaaccctctgtgcgaatgtgcattagtgggtttgat
gaacctgtcccagacctctgcagcctcaagcggctgacctaccagagtggggatgttccc
ctgatcttcgctctggtggaccatggtgacatctccttctacagcttcagagacttcaca
ctgcccagggatctgggccactga
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