Arvicanthis niloticus (African grass rat): 117713504
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Entry
117713504 CDS
T08817
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase 1
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00900
Terpenoid backbone biosynthesis
anu01100
Metabolic pathways
Module
anu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
anu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117713504
Enzymes [BR:
anu01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
117713504
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF1398
Motif
Other DBs
NCBI-GeneID:
117713504
NCBI-ProteinID:
XP_034365599
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All DBs
Position
8:complement(50995982..51007039)
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AA seq
283 aa
AA seq
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MWRGRTLARAIGCAVRGRGLGAGHAAERVEVLGSAQLLSTSSWNLSVLGQIKHSVTMPEI
NTNHLDEKQVQLLAEMCILIDENDNKIGADTKKNCHLNENIDKGLIHRAFSVFLFNTENK
LLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAMGVKRAAQRRLKAELGIPLEEVD
LNEMDYLTRIYYKAQSDGIWGEHEIDYILFLRKDVTLNPDPNEIKSYCYVSKEEVKEILK
KAANGEIKLTPWFKIIADAFLFKWWDNLNHLSPFVDHEKIHRL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcggacggacactggcgcgagcgattggatgtgctgttagggggcggggtctg
ggggcggggcatgctgcggagagggttgaagtactgggctcagcacagcttctcagcacc
tccagctggaatctcagtgttctaggtcagatcaaacattctgtcacaatgcctgaaata
aataccaaccatcttgatgaaaagcaggtccagcttctagcagagatgtgtattcttatt
gatgaaaatgacaataaaattggggctgacaccaagaaaaattgtcacctgaatgaaaac
attgacaaaggattaatacatcgagcttttagtgtcttcttgtttaatactgaaaataag
ctactgctacagcagagatcagatgctaagattacctttccaggttgtttcaccaatagt
tgctgtagtcatccattaagtaacccaggtgagctggaagaaaacaacgccatgggtgtg
aaacgagcggcacagagacgcttaaaagccgagttgggaatacccttggaagaggttgat
ctaaatgaaatggattatctaacaagaatttactacaaggcccaatctgatggtatctgg
ggtgaacatgaaattgattacattttgtttctgaggaaggatgtaaccttgaatccggat
cccaacgagatcaaaagctattgctatgtatcaaaggaagaggtcaaagaaattttgaag
aaggcagccaatggtgaaattaagttaactccgtggtttaagattattgcagatgctttc
ctctttaaatggtgggataacttaaaccatttgagtccatttgttgaccatgagaaaata
catagactatga
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