Amphiprion ocellaris (clown anemonefish): 111576229
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Entry
111576229 CDS
T06018
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04270
Vascular smooth muscle contraction
aoce04625
C-type lectin receptor signaling pathway
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111576229
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111576229
09153 Circulatory system
04270 Vascular smooth muscle contraction
111576229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111576229
Membrane trafficking [BR:
aoce04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111576229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
111576229
NCBI-ProteinID:
XP_023137582
Ensembl:
ENSAOCG00000021571
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPEMLGVSISSPNSPAA
ERPYSPQDRLSSAHSPWDENSVCNQKADILQKMLSKEQQELQAMKEEYSRNPSPKLLKDI
QEAKKHIPQLQGQLFRVTGTTQEAVPGGDADDGSMLETERTFAMKGDNSTDLSWTSSPIS
RIFGPGSPDSQCPRDSSCPSPKSTPRNSFNSCHSPETEDTTDLDSLSPTTVSSPSSSRLV
SQIIGAEDDYFDSDQEQTNGQCNSFNTIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYA
DLYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESVSSDLDRRRTELIPEEINRQHVQT
LQDSLLPDIQRNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIITKIE
DILLTTQTAEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRISFLPKIKKSIKTEKE
GEEKVKKPRFPSILGPQRRPSRNEAASVSKALDGRPRPQKQLSQPTLGASEHMETGHLRG
SQSSEGSELTHSMSVNASSPNSAFYSTESSRDADIGGTPTSGPSRLSDGLQSDPLDGFSS
HFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNWQQLV
GREVLAGLRPHEIKRQEVINELFYTERAHVRMLKVLDHVFYQKLSKEAILPPADIKNIFT
NLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFGSGEEEKIKQAVGTFCSNQPF
ALEIIKTKKKDSRFTSFIQEAESNRLCRRLQLKDLIPIEMQRLTKYPLLLDNIVKYTDNA
VEKDKVKQAADCCRKILSHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLD
LTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKH
IFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQRADAM
KVKPHSVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESGPACRSALQTS
LPGSNPFEGVKAEEEEEEGFVDPELPYQVAEDGREGDSFSMFPLRADEALKTLAALKQVL
VTQLMSQEAAEQTKRSTGARLLRTTSLRTPIDSRARVMVHNGSEKNSSQTEDLAQDLGSG
DTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGINLRFSST
SQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIHQRPERSAADTDGNKDKR
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccggacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaagggaagcctgagtcctgtggtctggtccaacgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagcggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaagtggtgaaacttatcaaatcg
ggctcctatgtggcccttacagtgctggggcgccccccagggcttgcccagatccctttg
cctgaagcagagcctgaaatgttgggcgttagcatatcctctccaaactccccagcagca
gagcgtccctacagtcctcaggaccgcctctcctctgcacattcaccatgggatgagaac
agtgtctgcaaccagaaggctgacatcttgcagaagatgctctctaaagagcagcaggag
ctacaggccatgaaggaggaatacagcaggaacccctcccccaaactactgaaagacatc
caggaagctaaaaaacacattcctcagctgcagggtcagcttttcagggtcactgggaca
acacaggaggctgttccaggtggtgatgcagatgatggtagcatgttggagacagagcgt
acttttgccatgaaaggagacaacagtacagacctgtcctggaccagcagtcctatatct
cgcatatttgggcctggatctccagatagccagtgtcccagagattcctcctgccccagc
ccaaagagcacacccaggaacagcttcaactcctgccactccccagagactgaggacacc
accgatctggactctctatctcccactacagtcagcagtccctcctcttctcgccttgtc
tcccaaatcattggagctgaagatgactattttgattcagaccaggagcagacaaatggc
cagtgtaacagctttaacactattgagcagctcaagtctcgccctgcccacctcgcagcc
ttcctgcatcacgtcatctctcagttcgatcccgctcctgtgctgtgctacctctatgct
gacctctacaaacagaccaactccaaagagaccagacgggtgttcatggacctccacacc
ttcttcattgaccggggagcaaatttaaaagttgcagttcctgaatctgtctcttctgat
ctcgatcggaggcggacagagctgatcccagaggaaataaacaggcaacatgttcaaaca
ctgcaggactctctgctccctgacattcagagaaaccttgaggattttaggcagaagcgc
agtatgggcctaacagtggctgaagtagagctggccagactggaccaagagagagtcaga
gaccgggtcactctcgagcgggaacgctcatatgctgaaaacatcatcaccaagatagaa
gatatcctgttaactactcaaaccgcagaggaagagaaatgcactacaatgcagtatgtt
atctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggagtcc
aaacgggttcgaattagctttcttcccaagattaagaaaagcatcaagacagaaaaggag
ggagaagagaaagtgaaaaagcccaggtttcctagtatccttggccctcagcgtcggccc
agccgcaatgaggcagcctcagtgagtaaagccctggacggccgtccccggcctcagaaa
cagttgtctcagcctacactgggggcaagtgagcacatggaaactgggcatctaagaggc
agccagtctagcgagggctctgagctcacacactccatgtctgtcaatgcctcatctcca
aacagcgccttctacagcactgagtctagtcgagatgctgatattggtgggactcccacc
tctggcccttccaggctgagtgacggccttcagtctgaccccttggatgggttttcttcg
cactttgacctgtacagcctggaccaactgcaagaggatgacagagaaagtgacagagct
catgagggaacaccaaaggccataagaaggctcgagggactgggtgcagctgatgtccag
agtgaggacgaccaggggacagattcagagcatgatcctccaaactggcagcagctggtg
gggcgagaggtcctagcgggtctcaggcctcatgaaatcaagagacaggaagttatcaat
gagctgttttacacggagcgtgcacatgtgcggatgctgaaggttttggaccacgttttc
taccagaagctctccaaagaggccatcctgcctcctgctgacattaagaacatctttacc
aacctggaggagattttacagctgcatgtttcaatacttgagcaaatggctgccgttcgg
aagagaaatgaatcttcagtaattgatcagataggagacgacttgctctcttggtttggc
agcggagaggaagagaagatcaagcaggcagtggggaccttctgtagtaaccagcctttt
gctctggaaatcataaagaccaagaagaaagactcaagattcacctcgttcattcaggag
gcagagagtaacagactgtgtcgcagactgcagcttaaggacctcattcctatagagatg
cagcgtctcaccaagtatcccctgctactagacaacatcgtcaagtacacagacaatgca
gtggagaaagataaagttaagcaggcagcagactgctgtagaaagatcctcagtcacgtc
aaccaggctgtgaaggaatctgaggacaagcagaggttggaagactatcagaggagattg
gacctctcctctctaaagcagacagacaaccccatgatcctggaactaaagaacttggat
ctaacaaagagaacgatggtgcatgagggtccactgtcatggaaagtgaacaaggacaag
actattgagttgtacacactcctcctggaggacatcctggttctgctacagaaacaagat
gagcgtctgatcctgaagtgtcacagcaaaaacctggcgggcactgctgataccaaacat
atcttcagccccatcatcaaactgaacactgtgctggtgcgctccgtggctacagacaac
aagtccttcttcgttctatccatgtcagacaacggtgcccagatctatgagctaatggca
cccacagtctcagatcagagaacgtggcagcgtctaatcacccagagagctgatgccatg
aaagtcaagcctcacagcgttatcccattacctcagaccgacggtgagagagacggcgtg
gagataattacagcaggtgtttccaggttgagtagagacccagaccgcacatccaccggc
agcacccagtccacagataaagagagtggtccagcttgtagaagtgcattgcagacttct
ctgcctggtagtaatccgtttgagggagtgaaggcagaggaggaggaggaagaaggcttt
gtggacccggagcttccttatcaagtggctgaggatggcagagaaggagactcgttcagc
atgtttcccttgagggcagacgaagcactgaaaacattggcagcattaaagcaggtgttg
gtgacccagctgatgtcccaggaggcagcagaacaaaccaaacgctcaacgggggcccgt
ctcctcaggaccacatctctgcgaacgcccatagacagccgtgcacgagtgatggtccac
aacggctcagagaaaaacagttcccagacagaggacttggctcaggacctgggctctggg
gacaccggcttctttgattcacctgaagattatgcaggatatttggtcctggagggttac
ggtggcccaggagagagcagcacagatgacgacatcttagcgtcaaccacagggaagcag
ctgagaacctcacagggctgcgctgccgactctggcatcaatttgagattttcctcaaca
tcacaggctggcagcctctcctctttcagcagacaggtcctgtctcatcttagaaatctt
caagccaacctcaactatctgaaggaggttgaggctaagtacaataatctaatacaccaa
aggccagagaggtcagcagcagacacagatggaaacaaagataagagatag
DBGET
integrated database retrieval system
