Alkaliphilus oremlandii: Clos_0010
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Entry
Clos_0010 CDS
T00607
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG family
KO
K03090
RNA polymerase sigma-B factor
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoe03021
]
Clos_0010
Transcription machinery [BR:
aoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clos_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_26
HTH_3
HTH_10
Fe_dep_repress
KORA
GerE
DUF1492
Alba
Trp_repressor
HTH_50
SieB
RsbU_N
Motif
Other DBs
NCBI-ProteinID:
ABW17580
UniProt:
A8MEA9
LinkDB
All DBs
Position
10249..11061
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AA seq
270 aa
AA seq
DB search
MANIANSTEADDYMIMNKSKKEKNLTEKELFKEYALTRDIEIRNELINRHLYIAEILSKK
FLNKGIEYEDIYQVASLGLIYAIERYDVTKGFEFSSFATPTIIGEIKKYFRDKGWSIRVP
RRIQELSKKVNVSKNTLQQTLQRTPTVKDIAEYLNCTEEEVIEAMEASQVYTPKSLDLIY
DNDGDDKDIQLLDLIGELDKRFDDIENKDFFQKAIDKLNEVEKKVLKDRFFNNKTQMKVS
EELNVSQMTVSRMEKRIIEKFKKELDRSME
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatattgcaaattccaccgaggcagatgactatatgattatgaataaatccaaa
aaagagaaaaacttaacggaaaaagaactttttaaagaatatgccctaacgagagatatc
gaaataagaaatgaattaatcaatcgacatttatatattgctgaaattttatctaagaaa
tttttaaataaaggaatcgagtatgaggatatctatcaagtcgcttctttaggactgatt
tatgcaatagaaagatatgatgtaacaaagggatttgagttttcaagctttgctacgcct
acaatcatcggtgaaataaagaagtattttagggataaaggttggtccattagagttcca
aggagaatacaggaattatctaagaaggttaatgtaagtaaaaatacgcttcagcaaacg
ttacagagaacacctactgtaaaagatattgcggagtatttaaattgcacagaggaagaa
gtcatagaggcaatggaagcaagtcaggtatatacgccgaaatctttagatctcatctac
gataatgatggagacgataaggatattcaattattggatctgataggagaactagataag
cggtttgatgatatagaaaataaagactttttccaaaaggccatagacaaattaaatgaa
gtcgaaaaaaaggtattaaaggatcgtttcttcaataacaaaactcagatgaaagtatca
gaagagctcaatgtatctcagatgacagtttctagaatggagaaacgcattattgaaaag
tttaaaaaagaattggatagaagtatggaataa
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