Asparagus officinalis (garden asparagus): 109822489
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Entry
109822489 CDS
T05243
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109822489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109822489
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
109822489
Complex B
109822489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
109822489
NCBI-ProteinID:
XP_020244282
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Position
8:complement(40011251..40017347)
Genome browser
AA seq
202 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQKIKEHLGQ
AAVQYQVGAAFNQFLQANPQRPRPPILPLPMGAPQMPIGSPFVPGIRPPVLPPPGTTSYG
AAPTVPPSMAPPIAPSMPMQVNNLPGPPMVNPPVPGATTAPTPNSAMNTVTYQANPSFTS
GSSTAPAGSTNSQETFAYSQNS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgcgactactgcgacacctatttgacccacgattctccttctgtc
aggaaacaacataatgccggctacaagcacaaggcaaatgttcgtacctactatcagcag
tttgaggagcaacagactcagagtttaatagatcaaaaaattaaggagcaccttgggcag
gctgcagtccaatatcaagtaggtgcagcttttaaccagtttctccaagcaaatcctcag
agacctcgccctccgattcttccattgccgatgggagcacctcagatgcctataggctct
ccgtttgttccgggaattagacccccagttttgccaccccctggcactacaagttatgga
gctgctccaactgttcctccatcaatggccccacctattgcaccttccatgccgatgcaa
gtgaacaatctccctggaccaccgatggtgaatcctccggtccctggagctacaactgca
ccaacacctaacagtgctatgaatactgtgacatatcaagccaatccgtcgtttacttct
ggttcctctactgcgccagctggtagcactaactcacaggaaacttttgcatattctcag
aattcttag
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