Asparagus officinalis (garden asparagus): 109827913
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Entry
109827913 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein HASTY 1
KO
K14289
exportin-5
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109827913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109827913
03036 Chromosome and associated proteins [BR:
aof03036
]
109827913
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109827913
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
109827913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
109827913
NCBI-ProteinID:
XP_020250524
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
HLVRFRWDEFSVTERSDFAKVAVNLLSEVINPQEEWALKSQTTALVAEVIRREGVTLWQE
LLPALVSLSNKGPIEAELVAMMLRWLPEDITVHNEDLEGDRRRALLRGLTESLSEILPLL
YTLLEKHFGLALSEYGKQQLVAAKQHASTVTAALNAVNAYAEWAPVPDLARYGLIHGCGF
LLSSLEFRLHACEFFKLVSQRKRPVDVTSSEFDSAMSNVFQILMSVSGDFLNKSSSSIAG
IDESEFEFVECICESLVALGSSNVQCILGDGTLMSQYLQLMLGYFQHFKLALHFQSLLFW
LVVMRESMSKQKTPVQTAGDNNVAVQAEEKKGVSSLLNDDMYAVILDVSLQRMLKKNITP
GSTPSVEALELXXXXQYRSRLLELIRLVASQKPVVAVSKVSQRIGTVISSSVIFPISAQG
LALLESLQLGLETIVSAVFDGSSDFSCASEIKCQLQTILEGLLQQLLSLKWTEPALAELL
GRFLDAFGPYLKYFSDSVAAVVNKLFELLTSLPFTLKGPSLTGARHARLQICSSFIRIAR
AADKSLLPHMKGIADTMAYLQGEGRLLRGEHNLLGEAFLVMASSAGIQQQQEVLAWLLEP
LSKQWVQLEWQNAYLSDPLGLVRLCSDTQFMWNIFHTVTFFEKALKRSGNKKANWNIQSQ
SPTSDICTYIHPMSSHLSWMLPPLLRLLRCIHSLWSEPVAQALTGELRAAKCMNPVEQAS
LLGEGNVKILKGQMTSGDGSQVDASREGESTENDIRNWLKCIRDSGYNVIGLSATIGDYF
FRCIESPSVALSLMETVQSMEFRHIRQLIHSIVIPLVKFCPPDLWGSWLETLLHPLFLHC
QQALFCSWTSLLQEGRAKVPDNFGNLAGLDLKVEVMEEKLLRDLTREICSLLSTLASPVL
NSGLPSLEQLGNANRMEASLPQNLDSFSSNSMICFLMGHKGPALPALQISIEVFNWTDGE
AVTKIVPFCGSLILLAASTNCTELGEFVVKDLFNAIIRGLTLESNAIISSDLVGLCREIF
VYLLNKDPSPRQVLLSLPCITREDLLAFEDALLKTSSPKEQKQHMRSLLQLATGNNLKAL
AAQKITNVITNVTARTRNTSSVPRSGIEDDGVIGLAAIT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
catttagttcgattcagatgggatgaatttagcgttacagaacgaagtgatttcgctaag
gttgctgttaacttattatcagaagtgatcaaccctcaggaggaatgggcgttgaagagt
caaacaactgctcttgttgctgaggtaatcaggagagaaggagtaaccttatggcaggag
ctgctgccggctttagtttctctatccaataaaggccccatagaggcagagttggttgcg
atgatgttgagatggcttcctgaagatatcacagttcacaatgaagatttagaaggtgat
cgtcgtagggcattattgcgagggcttactgaatctctgagtgagattttgcctttgcta
tacactctactcgagaaacactttggtcttgctttaagtgaatatggcaagcaacaactg
gttgctgcaaaacaacatgcatctacagtgactgccgctttaaatgctgtcaatgcttac
gctgaatgggctcctgttcctgatcttgccagatatggcctgatacatggatgtgggttt
ttactctcttcccttgagtttcgccttcacgcttgtgaatttttcaaacttgtttcccaa
agaaaaaggcctgttgatgttacttcctcagaatttgactctgcaatgagtaacgtcttc
cagatcctgatgagtgtgtctggggattttttaaacaaatctagctccagtattgctggt
attgatgaaagcgaatttgaatttgtggaatgtatatgtgagagtctggtggccttaggt
tcttctaacgtgcaatgcattttgggtgatggaaccctaatgtctcagtatcttcaactg
atgctgggctatttccaacattttaagctcgcgctgcattttcagtctttgcttttttgg
ctggtggtcatgagagaatcaatgtcaaaacagaagactcctgtacaaactgctggagat
aataatgtggcagttcaggcagaggagaagaaaggggtttcatctctcctcaatgatgac
atgtatgctgttattttggatgtgtctctccagagaatgctcaaaaagaatattacacct
ggatccactccatcagtcgaggcattagaattatgnnnnnnnnnncaatatcgttctaga
ttgttggagctgatcagacttgttgcttctcagaagcctgtggtagctgtctcaaaggtc
tcacaaagaattggtactgtcatcagcagttcagtcattttcccaatatcagcacagggt
ttagcattactggaaagcctgcaactaggccttgaaacaattgtgagtgcagtctttgat
ggatcatctgacttctcctgtgcttctgaaataaaatgccaactacagacaattttggaa
ggtttgcttcaacaacttctttcattgaagtggactgaaccagcgcttgcagaattgctt
gggcgatttttagatgcattcggtccctatctgaaatacttctctgactcggtcgcagct
gttgtgaataaactttttgaacttctgacatctcttcctttcactctaaagggcccttct
ttaactggtgctcggcatgctaggttgcaaatttgttcatcattcatccgtattgctaga
gctgctgacaaaagtctccttcctcacatgaagggtattgctgacacaatggcatatctc
caaggtgaaggtcgattgcttcgtggtgagcataatcttcttggtgaagcatttcttgtt
atggcctcttctgctgggattcagcaacaacaagaagtgctggcctggttacttgaacct
ttgagcaaacagtgggttcaattagaatggcaaaatgcttatttgtccgacccattaggg
ttggtacgtctatgctctgatactcaatttatgtggaacatatttcacactgtgacattc
tttgagaaggcgcttaaaaggagcggaaataagaaggccaactggaatatccaaagtcag
tcaccaacaagtgacatttgtacttatattcatcctatgtcttctcatttgtcctggatg
ttacctccgctcctaaggcttcttcgttgtatacattctctttggtcggagcctgttgct
caagctttgacaggagaactaagagcagcaaagtgtatgaatccagttgagcaagccagt
cttctaggagaaggaaatgtgaaaattttgaaaggtcaaatgacctctggtgatggatct
caggttgatgcaagcagggaaggagagtcaacagaaaatgacatcaggaactggttgaaa
tgtataagagacagtgggtacaatgtgattggtttgtcagcaactataggggactacttc
ttccggtgcatagagagtccttcagttgcactttctctaatggagactgtacaatcaatg
gaatttcgacatatacgtcagcttattcactcaatcgtaattcctctggtcaagttctgc
cctccagatttatggggttcatggctagaaactctgttgcatccattatttctgcactgc
cagcaagctcttttttgttcatggaccagtcttctacaagagggtagagcaaaagttcct
gataattttggcaatctcgctggtttagacctgaaggttgaagtaatggaagaaaagttg
ttgcgtgatctgactcgggaaatatgttctctcctctcaactctagcatcaccagttctt
aactctgggcttccttctttagaacaacttggcaatgctaatcgcatggaagcgtcacta
cctcaaaatttggattcattttcatcgaactcaatgatatgctttctgatgggacataaa
ggtcctgctcttcctgcgctgcagataagtattgaagtatttaattggacagatggtgag
gcagtaaccaaaattgtccccttttgtggatctctgattcttcttgctgcttcaactaat
tgcactgaacttggagagtttgttgttaaggatttattcaatgctattattcgaggttta
accctcgagtcaaatgctattataagttctgatcttgttggtttgtgccgagaaatattt
gtatatctattgaataaagacccctctccgagacaggttctgctgtcccttccttgtatc
actagggaagatttacttgcttttgaagatgctctgctaaaaacaagtagtcctaaagaa
caaaagcagcacatgaggagcctactccaactagctactggaaataacttgaaagcacta
gctgctcaaaagatcaccaatgtcataaccaatgttacagctagaaccagaaacacgtca
tcagttcctaggtctggcatcgaagatgatggtgtcatcgggttagcagccattacatga
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