Asparagus officinalis (garden asparagus): 109847940
Help
Entry
109847940 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: COMPASS-like H3K4 histone methylase component WDR5B
KO
K14963
COMPASS component SWD3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109847940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aof03036
]
109847940
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
109847940
NSL complex
109847940
HMT complexes
COMPASS/SET1 complex
109847940
COMPASS/SET1 complex (yeast)
109847940
MLL-HCF complex
109847940
MLL3/MLL4 complex
109847940
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109847940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
eIF2A
WD40_like
PROPPIN
DUF5888
Motif
Other DBs
NCBI-GeneID:
109847940
NCBI-ProteinID:
XP_020272759
LinkDB
All DBs
Position
7:147159563..147163321
Genome browser
AA seq
310 aa
AA seq
DB search
MSASSRPRQPAPYSPYRSSTTLRHHSSAVSCVKFSTDGCLFXSASLDKTLAVFSSSDPTS
GPIAVLSGHSAGVSDLAWSSDSRYVASASDDRSLRIWDLKSKTFDCVRTLHGHQNFVFCV
NFNCQSNLIVSGSFDETIKVWDVLGGKCVKTFEGHEAPVTSVHFNRDGSIIVSGSHDGTC
RIWDTATGACLKVHVEDKVPKPAVSFVKFSPNGKFVLVAALDSTLKLWNYSQGKIVKTYT
GHVNKVYCITSTFSVTNXYLWDLQNKNMLQKLEGHTDTVISVSCHPIENKIASAGLDNDR
TVRIWVQDTR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcctcacggccgcgtcagccggcgccttacagcccctaccggtcctccacc
actctccgccaccactccagcgccgtctcctgcgtcaagttctccactgacggctgcctt
ttcngctccgcctccctcgacaaaaccctagccgtcttctcctcctctgaccccacctca
ggccccatagccgtcctctccggccactccgccggcgtctccgacctcgcttggtcctcc
gactcccgctacgtcgcctccgcctccgacgaccgctccctccgcatctgggacctcaaa
tccaaaaccttcgactgcgtccggaccctccacggccatcagaacttcgtcttttgcgtg
aatttcaactgtcagtccaacttgattgtgtcggggtcgttcgatgagacgatcaaggtt
tgggatgttcttggcggaaagtgtgtgaagacgtttgaagggcacgaggctccggtgacc
tcggtgcattttaatagggatgggtcgattatcgtgtccgggagccatgatgggacctgt
aggatttgggatacggcgacgggggcttgcttaaaggtgcatgttgaggataaggtgccg
aagcccgcggtttcgttcgtgaagttctcgccaaatgggaagtttgtgcttgttgcggcg
ctggatagtacgctgaagctatggaactattctcaaggaaagattgtaaaaacatataca
ggacatgtcaacaaagtatattgcatcacatctacattctctgtgacaaatngatatttg
tgggatctccaaaacaaaaatatgctacagaaattggaaggtcacactgacactgtcatt
tcagtctcttgccaccctattgagaataaaattgcctctgctggtcttgataatgacaga
acagtgaggatctgggttcaagatactagataa
DBGET
integrated database retrieval system
