Bradyrhizobium oligotrophicum: S58_13960
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Entry
S58_13960 CDS
T02484
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase
KO
K03089
RNA polymerase sigma-32 factor
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aol03021
]
S58_13960
Transcription machinery [BR:
aol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
S58_13960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
KORA
HTH_3
Sigma70_r4_2
HTH_7
GP3_package
GntR
HTH_23
HTH_Crp_2
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BAM87405
UniProt:
M4ZME0
LinkDB
All DBs
Position
complement(1581397..1582296)
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AA seq
299 aa
AA seq
DB search
MARTATLPVLNGESGLARYLSEIRKFPMLEPQEEYMLAKRWREHDDSDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLHPDQVQLIAKRLGVTAQDVVDMNRRL
GGDASLNAPIRDDGEAGEWQDWLVDNTPNQEAIMAEHEEYDHRRQALNGAIGVLNARERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGAIAQQEAAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagctacactcccggttctcaacggagaatccggacttgctcgctacctc
tccgagatccgcaagttcccgatgctggaaccgcaggaggagtacatgctcgccaagcgt
tggcgtgagcatgacgacagcgacgcagcacataaactcgtgaccagccatctcaggctc
gtggccaagatcgccatgggctatcgcggctacggcctgccgatatccgaagtcgtatcg
gaaggcaatgtcggcctgatgcaggctgtgaagaggttcgagcccgagaagggctttcgc
ctcgccacctacgccatgtggtggatcaaggcgtcgatacaagagtacattctgagatcg
tggtcgctcgtgaagatgggcacgaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggccaagagcaagatctctgcgctggacgaaggcgatctgcatccggatcaggtgcag
ctgatcgcgaagcgcctcggcgtgaccgctcaggacgtggtcgacatgaaccgccgcctc
ggcggcgacgcctcgctgaacgcgccgatccgcgacgacggcgaagcgggcgaatggcag
gactggctggtcgataatacgcccaaccaggaagccatcatggccgagcacgaggagtat
gaccaccgccggcaggcgctgaacggcgcgatcggcgtgttgaatgcgcgcgagcgccgc
atcttcgaggcgcggcgcctggccgacgagccgatgacgctcgaggatcttgctgccgag
ttcggcgtgtcgcgcgagcgcgtgcgccagatcgaggtgcgcgccttcgagaaggtgcag
tcggccgtcaagggcgccatcgcccagcaggaggcggcggcgctggaggccgcgcactaa
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