Aquabacterium olei: DEH84_15345
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Entry
DEH84_15345 CDS
T05429
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aon
Aquabacterium olei
Pathway
aon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEH84_15345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aon03019
]
DEH84_15345
Enzymes [BR:
aon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DEH84_15345
Messenger RNA biogenesis [BR:
aon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DEH84_15345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AWI54644
UniProt:
A0A2U8FW41
LinkDB
All DBs
Position
complement(3400257..3401807)
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AA seq
516 aa
AA seq
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MTLNTSEVADLAPAAPAVAAAPEAAPSAAVAEAPALFNTLPLDAKLLRAIEAQGYATMTP
IQAKAIPMVLAGRDVMGAAQTGTGKTAAFSIPLLQKMLKHENASMSPARHPVRAVVLAPT
RELADQVANNVKAYAKQTNLRVAVVFGGIDMKPQTAELKGGVEVLIATPGRLLDHIEAKN
CNLGQVEYVVLDEADRMLDIGFLPDLQRILSYLPKQRQTLLFSATFSTEIKKLAQSYLQD
PVLVEVARPNATATNVEQRFYKVDEDDKRAVIRQILRDRNINQSIVFVNSKIGAGRLARA
FERDGLKTAALHGDKSQDERLKALAAFKAGEMDLLVATDVAARGIDIAALPAVFNYDIPF
NAEDYVHRIGRTGRAGASGLAVSLVTGADARLMADIEKLIKKKPDVEAFELERRGYGDRG
GYRRERRDEGDSRPDEGFGRGAPREARAPRPMSSSPRRAPSDPFFDKPYEPTTPDAAPAW
EKGDAAVPAAGNGLSRFIKPKRKVAMLLGGSGTARR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgaatacctctgaagtggccgatctggccccggctgcaccggcagtcgccgcg
gcacccgaagccgccccctccgccgccgtggccgaggcccccgccctgttcaacaccctg
ccgctcgacgccaaactgctgcgcgcgatcgaggcgcagggctacgcgacgatgacgccc
atccaggccaaggccatcccgatggtgctggccggtcgcgacgtcatgggcgcggcacag
acgggcaccggcaagaccgccgcgttctcgatcccgctgctgcagaagatgctcaagcac
gagaacgccagcatgtcgccggcccgccacccggtgcgcgccgtggtgctggcccccacg
cgcgagctggccgaccaggtcgccaacaacgtcaaggcctacgccaagcagaccaatctg
cgcgtggccgtggtgtttggtggcatcgacatgaagccccagacggccgaactcaagggc
ggcgtcgaggtgctgatcgccacgccggggcgcctgctcgaccacatcgaggccaagaac
tgcaacctcggccaggtcgagtacgtcgtgctcgacgaggccgaccgcatgctggacatc
ggcttcctgcccgacctgcagcgcatcctgagctacctgcccaagcagcgccagacgctg
ctgttctcggccacattctcgaccgagatcaagaagctggcgcagagctacctgcaggac
ccggtgctggtcgaggtggcgcgcccgaacgcgacggccaccaacgtcgaacagcgcttt
tacaaggtcgatgaagacgacaagcgcgcggtgatccgccagatcctgcgcgaccgcaac
atcaaccagtccatcgtcttcgtgaactcgaagatcggcgccggtcgcctggcccgtgct
ttcgaacgcgacggcctgaagaccgcagcgctgcacggcgacaagtcgcaggacgagcgc
ctgaaagccctcgcggccttcaaggccggcgagatggacctgctggtggccaccgacgtg
gctgcccgcggcatcgacatcgcggcgctgccggcggtgttcaactacgacatccccttc
aacgccgaagactacgtgcaccgcatcggccgcacgggccgtgccggcgcgtcgggcctg
gcggtgtcgctggtcacgggggccgatgcgcgcctgatggccgacatcgagaagctgatc
aagaagaagccggacgtcgaggcattcgagctcgagcgccgtggctacggtgaccggggt
ggctaccgccgcgagcgccgtgacgagggcgacagccgcccggacgagggtttcggccgc
ggtgcgccgcgcgaagcccgtgcgccgcggcccatgtcgtcgtccccgcgtcgtgcgccg
tccgacccgttcttcgacaagccctacgaaccgacgacacccgatgccgcaccggcgtgg
gaaaagggcgacgccgccgtgccggcggcgggcaacggtctgtcgcgcttcatcaagccc
aagcgcaaggttgcgatgctgctgggtggctcgggcacggcccggcgctga
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