KEGG   Amycolatopsis orientalis: SD37_12655
Entry
SD37_12655        CDS       T06703                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aori  Amycolatopsis orientalis
Brite
KEGG Orthology (KO) [BR:aori00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aori03400]
    SD37_12655
Enzymes [BR:aori01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SD37_12655
    5.6.2.6  RNA 3'-5' helicase
     SD37_12655
DNA repair and recombination proteins [BR:aori03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SD37_12655
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AAA_25 DUF6406 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: ANN16418
UniProt: A0A193BW75
LinkDB
Position
complement(2847993..2852615)
AA seq 1540 aa
MEGVADVLDLFSPATRDWFTGAFAAPTRAQEGAWRAAHAGEHALVVAPTGSGKTLSAFLW
ALDRLSVEPPPSEPRKRCRVLYVSPLKALAVDVQRNLRAPLAGISQASRRLGLPVPDIGV
GMRTGDTTAAERRSFGKTPPDVLVTTPESLFLILTSSARESLRGVETVIIDEVHAVAGGK
RGAHLALSLERLDALLEKPAQRIGLSATVRPIDEVASFLAGGRPVTVVQPKLAKTIEVRV
EVPVEDMSNLDGPQGPKQNEDLDAGLARLPGALEEIDGAPRRPSIWPAVEERVLELIQAH
RSTIVFANSRRLTERMTARLNELVAEQSELEPDQRFPAEAIGQSGLTTGAAPVIARAHHG
SMSREQRTHVEEELKTGRLACVVATSSLELGIDMGAVDLVVQIEAPPTVASGLQRVGRAG
HQVGAVSSGVMFPKFRGDLVSCAVVAERMASGAIEAVRYPRNPLDVLAQQIVAMVALESW
TVDDVAALVRRAAPFASLPDDALLAVLDMLAGRYPSEEFGELRARITWDRVSGELHGRPG
SQRLAVTSGGTIPDRGLFTVMTPGADDKPGSRVGELDEEMVYESRVGDTILLGTSSWRVT
DITHDRVIVVPAPGEPARMPFWKGDAPGRPLELGRALGAFVRELSTSEPSVARERAAVAG
LDEYACDNLLAYLEEQKSATRHVPNDKTVLLERFRDELGDWRVILHSPFGAQVNAPWALA
IAARLRENRGVDAQVAHSDDGIVLRLPEALDSEGSEITIGVEDVLLDPEEVEQLIVAEVG
GSAVFAARFRECAARSLLLPRRDPRRRTPLWQQRQRASQLLSVAAKYERFPVVLEAMREV
LQDVYDVGGLRELMADVRSRKVKLVEVETPSASPFARSLLFGYVGMFLYETDAPLAERRA
AALALDSTLLAELLGTEAIRELLDAEVVAEVERSLQRLEPDRHARNAEEAADLLRFLGDL
SIEEAAARGIRREWLEELEAARRVIRVRIGGGERFIAIEDAGRVRDALGTALPVGVPEAF
TEPVEDPVGDLLSRYSRSRGPFSARQAAERFGLGTAVVTGVLDRLTAQGRLVRGELSPVG
HPETHGVGMEFCDASVLRRLRRASLARLRAEVEPVEPAALGRFLPSWHGIGARMRSAPTA
DDVLSVVEQLAGAPLPASAVESLILPSRLPGYTPSLLDELTTAGEVTWCGCGSLSGGDGW
LALAPTDVADLLLPDLDDDLPSGPLHEAILSTLEGGAQFFRQLVDRASPLVETPPNDGEV
VAALWDLVWAGLVTGDTLGPLRAQVSGSGAAHKPRRQAPRGRYARLRAGRPAMPSRTGPP
TVAGRWALTPERAPDPTRRALARTEAFLERHGVLTRGALDTERVTGGFSGIYKVLRGMED
SGQVVRGYVVEGLGAAQFAAKGAVDRLRAQSGNQRTTREGAVVLAAADPAQPYGAALPWP
AATGDTKHRPARKAGALAVLVDGVPAMYVERGGRSLLSFTEDQETLRSAARALSTAVREG
WLGQLAVQKADGEVALTSELSSVLQEAGFRATPKGLRLRA
NT seq 4623 nt   +upstreamnt  +downstreamnt
atggagggcgtggcagacgtactcgacctcttctcccccgcgaccagggactggttcacc
ggggccttcgccgcgcccacccgcgcgcaggaaggggcttggcgagccgcgcacgccggg
gaacacgcgctggtcgtggccccgacagggtccggtaagacgctctcggcgttcctctgg
gcgctggacaggctgtcggtcgagccgccgccgtccgaaccgcgtaaacgctgccgtgtc
ctctatgtctccccgctgaaggcactggccgtcgacgtccagcgcaacctgcgggccccg
ctggccggtatctcccaggcgtcgcggcggctggggctgccggtgccggacatcggcgtc
ggcatgcgcaccggcgacaccaccgcggccgagcggcgctccttcggcaagacaccgccg
gatgtgctggtcaccacaccggagtcgctgttcctcatcctcacctcctccgcgcgcgaa
tcgctgcgcggcgtggagacggtgatcatcgacgaggtgcacgcagtcgccggcggcaaa
cgcggcgcgcatctggccctctcgctcgaacggctcgacgccctgctcgagaagcccgcg
cagcggatcggcttgtcggcgacggtccgcccgatcgacgaggtcgcctcgttcctcgcc
ggcggcaggccggtcacggtcgtccagccgaagctcgcgaagacgatcgaggtccgcgtc
gaggtcccggtcgaggacatgtccaatctcgacggacctcaggggccgaagcagaacgaa
gacctcgacgcgggtctcgcccggttgccgggcgcgctggaggagatcgacggcgcaccg
cgcaggccgtccatctggcccgccgtggaggaacgggtcctcgaactgatccaggcccac
cggtcgacgatcgtgttcgcgaactcgcggcggctcaccgagcggatgacggcgcggctc
aacgaactcgtcgcggaacagtccgaactggagccggatcagcggttcccggccgaggcg
atcggccagtccgggctcaccaccggcgcggcgccggtgatcgcgcgggcgcaccacggc
tcgatgtcgcgggaacagcgcacccacgtcgaagaggaactcaagacgggccgcctcgcc
tgtgtcgtggcgacgtcctcgttggaactgggcatcgacatgggcgcggtggatctcgtc
gtgcagatcgaggcgccgccgacggtcgcttcgggtctgcagcgggtcggccgggccggg
caccaggtcggcgcggtgtcgagcggggtgatgttcccgaagttccggggcgacctcgtc
tcctgcgcggtggtcgcggaacggatggcgtccggggcgatcgaggcggtgcggtacccg
cgcaacccgctggacgtgctcgcgcagcagatcgtggcgatggtggcgctggaatcgtgg
acggtcgacgacgtggccgccctcgtccgccgcgcggcgccgttcgcttccctgccggac
gacgcgttgctggcggtgctcgacatgctcgccggccggtacccgagcgaggagttcggg
gaactgcgcgcccggatcacctgggacagggtcagcggcgaactgcacggccgccccggt
tcgcagcggctcgcggtgacctccggcggcacgatccccgatcgcggcctgttcaccgtg
atgacgccgggtgccgacgacaaacccgggtcgcgcgtgggtgaactcgacgaggagatg
gtctacgaatcccgcgtcggggacacgatcctgctcggcacctcctcctggcgggtcacc
gacatcacccacgaccgggtgatcgtcgtgcccgcgccgggtgagcccgcgcggatgccg
ttctggaagggcgacgcccccggccgcccgctggaactggggcgggcgctgggcgcgttc
gtccgcgaactgtccacttcggaaccgtcggtggccagggagcgcgccgccgtcgccggg
ctggacgagtacgcgtgcgacaacctgctggcgtatctggaagaacagaagtcggcgacc
cggcatgtcccgaacgacaagaccgtcctgctggaacggttccgcgacgaactcggggac
tggcgggtcatcctgcactcccccttcggcgctcaggtcaacgcgccgtgggcgctcgcg
atcgcggcccggctgcgggagaaccgcggggtcgacgcgcaggtggcgcattccgacgac
ggcatcgtgctgcggctgccggaggccttggactccgagggctcggaaatcaccatcggc
gtcgaagacgtgctgctcgatccggaagaggtcgagcagctgatcgtggccgaggtcggc
ggttcggcggtgttcgccgcccggttccgggagtgcgcggcacggtcgctgctgctcccc
cgccgggatccgcgccgccgcaccccgctgtggcagcaacggcagcgcgcgtcgcaactg
ctttcggtggcggccaagtacgagcggttccccgtcgtgctggaagcgatgcgggaagtc
ctgcaggacgtgtacgacgtcggcgggctacgcgaactgatggccgatgtccggtcgagg
aaggtcaagctggtcgaagtcgagacgccgtcggcgtcgccgttcgcgcgcagcctgctc
ttcggctacgtcgggatgttcctgtacgagaccgacgccccgctcgcggaacggcgcgcg
gcggcgctggcgctggattcgacgctgctggccgaactgctcggcaccgaggcgatccgg
gaactgctcgacgccgaggtggtcgccgaggtcgagcggtcgctgcagcggctcgaaccc
gacaggcacgcccgcaacgccgaagaagccgcggatctgttgcggttcctcggagatctc
tcgatcgaggaggccgccgcacgcggtatccggcgggagtggctggaggagctggaggcc
gcgcggcgggtgatccgggtccgcatcggcggtggcgaacgtttcatcgccatcgaggac
gcgggccgggtgcgggacgcgctgggcaccgcgctgcccgtcggcgtgccggaagcgttc
acggaaccggtcgaggacccggtcggcgacctgctgtcgcgctactcgcgcagtcgtggc
ccgttcagtgcccggcaggccgccgagcggttcgggctgggcacggccgtggtcaccggc
gtgctggacaggctgaccgcgcagggcaggctggtgcggggcgagctgagcccggtcggg
catccggagacccacggcgtcgggatggagttctgcgacgcgtcggtgctgcgcaggctc
cggagggcgtcgctggcgcggctgcgggccgaggtggagccggtcgaaccggccgccctg
ggccggttcctgccgtcctggcacggcatcggcgcgcgaatgcgttcggcaccgacggcg
gacgacgtgctgtccgtggtcgagcagctggcgggcgcgccgctgccggcgagcgcggtc
gagtcgctgatcctgccgagcaggctgcccggctacacgccgtcgctgctcgacgaactg
accacggcgggcgaggtcacctggtgcggctgcggttccctgtccggcggggacggctgg
ctggcgctcgcgcccaccgacgtcgccgatctgctgcttcccgacctcgacgacgatctg
ccgtcgggtccgctccacgaggccattctgtccactttggagggtggggcgcagttcttc
cgccagctcgtcgaccgggcgtcgccgttggtcgaaacgccgcccaacgacggtgaagtc
gttgccgcgctgtgggatctggtgtgggccgggctggtcaccggggacacgctggggcca
ctgcgggcgcaggtctccggttcgggtgccgcgcacaagccccggcggcaagctccccgg
ggccggtacgcgcggcttcgggccggaaggccggcgatgccgtcgcggaccggtccgccg
acggtcgcgggccgctgggcgctcaccccggagcgcgcaccggacccgaccagacgtgcg
ctcgcgcggacggaggcgttcctggaacggcacggcgtcctcacccgcggcgccctcgac
accgagcgggtgaccggcggtttttccgggatctacaaggttttgcgcgggatggaggac
tcgggccaagtggtccgtggctacgtcgtcgaggggctcggggccgcgcagttcgcggcg
aaaggcgccgtcgacaggctgcgcgcgcagtccgggaaccagcgcaccacccgggagggg
gcggtcgtgctcgccgccgccgaccccgcccagccctacggtgccgcgttgccgtggcct
gccgcgacgggtgacacgaagcaccgtcccgcaaggaaagcgggagcgctggcggtgctc
gtggacggtgtcccggcgatgtacgtcgaacgcggtggccggtcgctgctgagtttcacc
gaggatcaggagaccttgcggtcggccgcgcgggcactgtccacagcggtacgggaaggc
tggctggggcagctcgcggtacagaaggccgacggcgaggtggcgctcacctccgagctg
tcctcggtgctccaggaggcgggattccgggcgactccgaagggcctgcgcctgcgggcc
tag

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