KEGG   Isoalcanivorax pacificus: S7S_14560
Entry
S7S_14560         CDS       T03580                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
apac  Isoalcanivorax pacificus
Pathway
apac02020  Two-component system
apac02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:apac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    S7S_14560
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    S7S_14560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apac03021]
    S7S_14560
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:apac02035]
    S7S_14560
Transcription machinery [BR:apac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     S7S_14560
Bacterial motility proteins [BR:apac02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    S7S_14560
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23
Other DBs
NCBI-ProteinID: AJD49324
UniProt: A0A0B4XM22
LinkDB
Position
complement(3278253..3278951)
AA seq 232 aa
MYTAQGKIDQDLLLEQHFPAVRRQALALQVKLPASIELDDLIQAGMVGLLDALRRFDPQA
GASFATFASQRIRGAMIDELRSRDWLPRSVRRNARQLDQCIHALEQRLGRAPQEREIASA
MGMSLADYRQLLNDTNNGQLLPFEDIVAEWGEPEAGSDGPPSPFNALQDDEQRQRLKRAI
DALPEREKLLIALYYQEELNLKEIGAVLGVTESRVCQLHGQAVSRLRARLSE
NT seq 699 nt   +upstreamnt  +downstreamnt
atgtatacggcacagggcaagatagaccaggacctgctgcttgagcagcatttcccggca
gtgagacgacaggcactggcgctgcaggtgaaactgccggcgagcattgaactggatgac
ctgatccaggccggcatggtcggcctgctggacgcgttgcggcgttttgatccccaggcg
ggcgccagtttcgccacgtttgccagccagcgcattcgtggcgccatgatcgacgaactg
cgcagccgcgactggctgccacgcagtgtgcgacgcaacgcgcggcaactggaccagtgc
atccacgcgctggaacaacgcctgggacgtgcaccgcaggagcgggaaatcgccagcgcc
atgggcatgtcgctggcggattaccggcaattgctcaacgacaccaacaacggccagctg
ctgccgttcgaggacatcgtggccgaatggggagagccggaagccggcagcgatggcccg
ccgtcgccgttcaatgcactacaggatgacgaacagcggcagcgcctgaaacgcgccatc
gacgccctgccggagcgggaaaaactgctgatcgcgttgtattaccaggaagagctcaac
ctgaaggaaatcggggcggtgctgggcgtgacggaatcgcgcgtgtgccagttgcacggt
caggcagtgagccggttgcgggcgcggctgtcggagtag

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