Isoalcanivorax pacificus: S7S_14560
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Entry
S7S_14560 CDS
T03580
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
apac
Isoalcanivorax pacificus
Pathway
apac02020
Two-component system
apac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
S7S_14560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
S7S_14560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apac03021
]
S7S_14560
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
apac02035
]
S7S_14560
Transcription machinery [BR:
apac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
S7S_14560
Bacterial motility proteins [BR:
apac02035
]
Flagellar system
Flagellar assembly proteins
Stator
S7S_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJD49324
UniProt:
A0A0B4XM22
LinkDB
All DBs
Position
complement(3278253..3278951)
Genome browser
AA seq
232 aa
AA seq
DB search
MYTAQGKIDQDLLLEQHFPAVRRQALALQVKLPASIELDDLIQAGMVGLLDALRRFDPQA
GASFATFASQRIRGAMIDELRSRDWLPRSVRRNARQLDQCIHALEQRLGRAPQEREIASA
MGMSLADYRQLLNDTNNGQLLPFEDIVAEWGEPEAGSDGPPSPFNALQDDEQRQRLKRAI
DALPEREKLLIALYYQEELNLKEIGAVLGVTESRVCQLHGQAVSRLRARLSE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtatacggcacagggcaagatagaccaggacctgctgcttgagcagcatttcccggca
gtgagacgacaggcactggcgctgcaggtgaaactgccggcgagcattgaactggatgac
ctgatccaggccggcatggtcggcctgctggacgcgttgcggcgttttgatccccaggcg
ggcgccagtttcgccacgtttgccagccagcgcattcgtggcgccatgatcgacgaactg
cgcagccgcgactggctgccacgcagtgtgcgacgcaacgcgcggcaactggaccagtgc
atccacgcgctggaacaacgcctgggacgtgcaccgcaggagcgggaaatcgccagcgcc
atgggcatgtcgctggcggattaccggcaattgctcaacgacaccaacaacggccagctg
ctgccgttcgaggacatcgtggccgaatggggagagccggaagccggcagcgatggcccg
ccgtcgccgttcaatgcactacaggatgacgaacagcggcagcgcctgaaacgcgccatc
gacgccctgccggagcgggaaaaactgctgatcgcgttgtattaccaggaagagctcaac
ctgaaggaaatcggggcggtgctgggcgtgacggaatcgcgcgtgtgccagttgcacggt
caggcagtgagccggttgcgggcgcggctgtcggagtag
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integrated database retrieval system