Candidatus Puniceispirillum marinum: SAR116_2385 Help Entry SAR116_2385       CDS       T01207                                  Name (GenBank) DNA-directed RNA polymerase   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism apb  Candidatus Puniceispirillum marinum Pathway apb03020   RNA polymerase Brite KEGG Orthology (KO) [BR:apb00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SAR116_2385  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:apb03021]     SAR116_2385    03400 DNA repair and recombination proteins [BR:apb03400]     SAR116_2385 Enzymes [BR:apb01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SAR116_2385 Transcription machinery [BR:apb03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      SAR116_2385 DNA repair and recombination proteins [BR:apb03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       SAR116_2385 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Biotin_lipoyl_2 Motif Other DBs NCBI-ProteinID:  ADE40628 UniProt:  D5BPX6 LinkDB All DBs Position 2602837..2607030 Genome browser AA seq 1397 aa AA seqDB search MNDLMNPFGQTQGPQSFDKIRISIASPERIRSWSFGEIKKPETINYRTFKPEKDGLFCAR IFGPVRDYECLCGKYKRMKYRGIICEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL PSRIGLLVDMTLKDLERVLYFENFVVIEPGMTSLVKGQLLSEEEYYDAQDEFGDDAFEAS IGAEAIKKVLVDLDLDQERVKIREELIATGSEAKRKKLVKRLKLVDAFKESGCRPEWMIL DVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML QESVDALFDNGRRGRVISGVNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP ELKLHQCGLPKKMALELFKPFIYSKLELYAMASTVKMAKRMVEKERPEVWDILEEVIREH PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE ARVLMMSTNNILSPANGKPIIVPSQDIILGLYYMSMIRDGEKGEGMAFSNVKEILLALGN GSVSLHAKVKARVPTRDANGERVLAVVETTPGRAQLADLLPDNPSCSFELVNKLMTKKEV SNVIDHVYRHCGQKDTVIFCDRLMSLGFGQACDAGISFGIADLTTPDLKEKYVNEAEDEV KTFEQQYLDGLITQGEKYNKVVDVWSRCSDLVADEMMKGISTEKDGEPINSVWMMAHSGA RGSAAQIKQLAGMRGLMAKPSGEIIETPIISSFKEGLNVLEYFNSTHGARKGLADTALKT ANSGYLTRRLVDVAQDCIIREVDCGTSKGLTIRPVLNGSEIVDSLYERILGRVLAEDLVD VKTSEVILPLGEMVTEEHFDKIDSSGADQALIRSALLCEAETGICANCYGRDLARGTDVN MGEAVGVIAAQSIGEPGTQLTMRTFHVGGAAQRDAQQSNIEATIGGTVKLEDATLVTDKN GIPIVMSRNTELLILDEKGRERLRHRLPYGGKLLVSEGEEIAAGKILIEWDPYTMPIITE MNGTAHYVDLTDGISVREVTDDTTGISSREVVDWKAAAGGANLRPRITLRDEKGEVLTLT NGLEARYFLSAGSILSIENGAEVQAGDVLARIPRESSKTRDITGGLPRVAELFEARKPKD FAVIAEADGRVEFGNDYKAKRRIRVVPLDGDLEAVEYLLPKGRPLAVNEGDVVRKGDLLL DGSPVPHDILSILGVEELAAYLVKEIQDVYRLQGVKINDKHIEVIVRQMLQKVEVEDAGD STFLVGEQVDREEFAQANTALEAEGLRIATAHPVLLGITKASLQTKSFISAASFQETTRV LTEAAVSGREDTLDGLKENVIVGRLIPAGTGSVMNRLRRIASERDKGILAQRAAAAPALE SNEFATESEETVVESDA NT seq 4194 nt NT seq  +upstreamnt  +downstreamnt atgaacgatttgatgaatcctttcgggcaaacgcaaggcccgcagagctttgacaaaatc agaatttccatcgcatcacccgagcgtattcggtcttggtcattcggtgagattaaaaag cctgaaacgataaactatcgtacgtttaagccagaaaaagacggtcttttctgtgcccgt atttttggtcctgttcgtgattacgaatgtctttgcggtaaatataagcggatgaagtat cgcggtattatctgcgaaaaatgtggtgttgaagttaccctttccaaagtacgccgtgag cgtatggggcatattgaactagctgcgcctgtcgcgcatatctggtttctgaaatcgctt ccaagccgtatcggtctgcttgtcgatatgacattaaaggatctggaacgcgttctgtat tttgaaaactttgtcgtgattgagcctggtatgacgtcgctggtcaaaggccagcttctg tcagaagaagaatattacgatgcgcaggacgaatttggtgatgatgcctttgaagccagt atcggtgccgaagcaatcaaaaaagttcttgtcgatcttgaccttgatcaggaacgcgta aaaatccgcgaagagcttattgcgacgggttcagaagccaagcgcaaaaagctggtaaag cgtttaaaacttgttgatgcgttcaaagagtctggatgtcgtcctgaatggatgatcctt gacgttgtgcctgtgattccacctgaattgcgcccactggtgccgttggatggggggcgc tttgcaacctctgaccttaacgatctctatcgccgggttatcaaccgtaacaaccgtcta aagcgtctgatcgagctgcgcgcaccggacattattgtccgtaacgaaaagcgtatgttg caggaatcagttgacgcgctgtttgacaatggccgtcgtggccgtgttatcagcggtgtc aataagcgccccttgaaatcactgtcagatatgctgaaaggtaagcaaggtcgttttcgt cagaacctgcttggtaagcgcgtcgattattctggccgttcggttatcgttgttgggcct gagctgaaactgcatcaatgtggtttgccaaagaagatggcgctggaactattcaagccg tttatctattcaaagctagagctatacgcgatggcgagtacggtcaaaatggccaaacgc atggtggaaaaagaacgccccgaagtctgggatattcttgaagaggtgatccgcgagcat ccggtgatgttgaaccgggcaccgaccctgcaccgtcttggtattcaggcgtttgagccg gttttgattgaaggcaaggccattcaactgcatccattggtatgtaccgcctttaacgct gactttgatggcgaccagatggcggtgcatgtgcctttgtcacttgaagcccagcttgaa gcccgtgttctgatgatgtcgacaaacaacatcctcagcccggccaatggcaagccgatc attgtgccgtcacaggatatcatccttggtctttattatatgtcgatgattcgtgatggt gaaaagggcgaaggcatggcgttctcgaacgtcaaagaaatcctgctcgcccttggcaat ggctcggtgagtctgcatgccaaggtaaaggcgcgtgtcccgacccgtgatgccaatggc gagcgtgtgttggcggttgttgaaaccaccccgggacgtgcccagttggctgatttgctg cctgacaacccgtcttgttcgttcgagctggttaacaagctgatgaccaagaaagaagtc agtaacgtgatcgatcacgtctatcgccattgtggtcagaaagacacggtgattttctgt gaccgtttgatgagtcttggttttggtcaggcatgtgatgctggtatttcgtttggtatc gccgatctgacaacgcctgatctgaaggaaaaatacgtcaatgaagctgaagacgaggta aagacctttgaacagcaatatctcgatggtctgatcacgcaaggtgagaaatataacaag gtggtcgatgtatggtcacgctgttcggatcttgttgctgatgagatgatgaaaggtatt tcaaccgaaaaagatggcgagccaatcaattcggtctggatgatggcgcattcaggtgcg cgtggttcggccgcccagatcaaacagcttgctggcatgcgcggccttatggccaagccg tcaggcgagatcattgaaaccccgatcatttcatcctttaaagaaggtctgaatgttctg gaatatttcaactcgacgcatggtgcccgtaaaggtctggctgacaccgctttgaaaacc gcgaattcgggttatctgacgcggcgtcttgttgacgtggctcaggactgcatcattcgc gaagtcgattgtggcacgtcaaaaggtttgacgattcgtccggtcttgaatggtagtgaa attgttgattcgctctatgaaaggattttgggacgggtgctggctgaagatctggttgat gtcaaaaccagcgaagtgattttgcctttgggtgaaatggtcaccgaagagcattttgac aagatcgactcatctggcgctgatcaggctttgatccgttcggcattgctatgtgaagcc gaaaccggcatctgtgcaaattgttatggccgtgatctggcgcgtggcaccgatgtgaat atgggtgaagctgtcggtgttatcgccgcccagtcaattggcgagccaggcacccagctg accatgcgtaccttccacgttggtggtgcggcacagcgggatgcccagcagtcaaatatc gaagcgacaatcggtggtaccgtaaagcttgaagatgcaacattggttacagacaagaat ggcattcctattgtcatgagccggaataccgaattgcttattcttgatgaaaagggacgc gaacgtcttcgtcaccgtctgccatatggtggtaaactgttggttagtgaaggcgaagag atcgcggctggcaaaatactgatcgaatgggatccatatacgatgccaatcatcacagaa atgaacggtactgcgcattatgtcgatttgactgatggcatatccgttcgtgaagtgact gacgatacaacaggtatctcaagccgcgaagtggtggactggaaagcggccgcgggcggt gcaaacctgcgtccacgcattaccttgcgcgatgaaaagggcgaagtgttgacattgacc aatggtcttgaggcacgctacttcctgtcagcgggttcaattctgtcgattgaaaatggt gccgaggtacaggctggtgacgtgctggcgcgtattccacgtgaatcatcaaagacgcgt gacattaccggtggtctgccccgtgttgccgaactctttgaagcacgtaagccaaaggac tttgctgttattgccgaggctgatggccgtgttgaatttggtaatgactacaaggcaaag cgtcgtatccgtgtggtgccgttggatggtgatttggaagcggttgaatatctattgcca aaaggccgcccactggctgtcaacgaaggtgacgtcgtgcgcaagggtgacttgttgctt gatggaagcccggtgccgcatgacattctgagcattctgggtgtcgaggaactggctgcc tatctggtcaaggaaattcaggacgtttatcgtctgcagggtgtgaagatcaatgataag catattgaagtcattgtgcgccagatgttgcagaaggtcgaagtcgaagatgctggtgac agtacattccttgttggtgaacaggttgatcgtgaggagtttgcgcaggccaatacagct ctggaagctgaagggttgcggattgccacagcgcatccggttttgcttggtattaccaag gcgtctttgcagacaaaatcctttatctctgcagcctcattccaggaaacaacccgcgtt ctaaccgaagcggctgttagcggtcgtgaggatacgctggatggtttgaaagagaatgtc attgtcggtcggttgattccggcaggaaccggttcggtcatgaatcggcttcgtcggatt gcttccgaacgcgataaaggcatcttggcacagcgcgccgccgctgcaccagcactcgaa agcaatgaatttgccaccgaatcggaagaaacagtggttgaaagtgacgcataa

DBGET integrated database retrieval system