Aeropyrum pernix: APE_1962.1
Help
Entry
APE_1962.1 CDS
T00023
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ape
Aeropyrum pernix
Pathway
ape00260
Glycine, serine and threonine metabolism
ape00460
Cyanoamino acid metabolism
ape00630
Glyoxylate and dicarboxylate metabolism
ape00670
One carbon pool by folate
ape00680
Methane metabolism
ape01100
Metabolic pathways
ape01110
Biosynthesis of secondary metabolites
ape01120
Microbial metabolism in diverse environments
ape01200
Carbon metabolism
ape01230
Biosynthesis of amino acids
ape01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APE_1962.1 (glyA)
09102 Energy metabolism
00680 Methane metabolism
APE_1962.1 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APE_1962.1 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APE_1962.1 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APE_1962.1 (glyA)
Enzymes [BR:
ape01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APE_1962.1 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAA80972
UniProt:
Q9YAH7
LinkDB
All DBs
Position
1240810..1242129
Genome browser
AA seq
439 aa
AA seq
DB search
MKELDLSDPLSMVLKIAELTTRHNVWRLRESINLIASENVMSLTALKAYLSDFMFRYAEG
KPFKRYYQGTRYIDELEVLTGELMGSMMGTNLVELRPVSGTIANASVFRVLAEPGDKAVI
APVQAGAHVSHTKFGTLGALGIEQVSMPYDEENMNVDVDKAVKLIEEVKPRFAVLGGSVY
IFPHPTREIAEAIHSVGGKLIYDAAHVLGLIMGGAWPNPLERGADAVTGSTHKTFPGPQG
GAVFFRDEQLYKKVSKTIFPWWVSNHHLHRIPATAITAVEMKLYGRDYASQVTSNARKLA
EALAAEGLKVIGEHLGYTRSHQVVVDVRDLGGGAKCASLLEESNIIVNKNLLPWDPPEAV
KDPSGIRIGVQEVTRLGMKHGEMEEIAKLIRKVLIDKEDPKKVAEQVKEFRKQFMKIHYS
LDDKDVRIDTIADILSLAQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagcttgacctttcagaccccctatccatggtccttaagatagcagagctgacg
acgaggcataacgtttggaggctcagggagtctataaatctcatagcctctgaaaacgtt
atgagtctcacagctctcaaggcatatttaagcgacttcatgttcagatacgcagaaggt
aagccatttaagagatactaccagggaacccgctatattgacgagctagaggtgctcacc
ggagagttaatgggtagcatgatgggtactaatctagtggagctcaggcctgtgagcggt
acaatagcaaacgcaagcgtcttcagggtactggctgagcctggggacaaggctgtcata
gccccggtgcaggccggagcccacgtaagccacacaaagttcggcacactgggtgctcta
ggtatagagcaggtctcgatgccctacgatgaggagaacatgaatgtcgatgttgacaag
gctgtgaagctcatagaggaggtcaagccgaggttcgctgtcctaggtggcagcgtctac
atcttcccacaccccaccagggagatagcagaggctatacacagcgtcggaggcaagcta
atctacgacgcagcccacgtgctggggctaataatgggtggggcctggcccaaccccctg
gaaaggggggctgacgcggttacaggctctacacacaaaaccttcccaggaccacagggc
ggggcagtgttcttcagggacgagcaactctacaagaaggtctcgaaaaccatcttcccc
tggtgggtaagcaaccaccacctacataggatacccgccactgctataaccgctgtggag
atgaagctctacgggagggactacgcatcccaggttacaagcaatgccaggaaactggcc
gaagccctagccgctgaagggctaaaggttataggcgagcacctaggatacaccaggagc
caccaagtcgtagtggatgtaagggatctagggggaggggccaagtgcgccagtttacta
gaagagtctaacataatagtgaacaagaacctactcccatgggatccccccgaggctgtc
aaagacccgagcggaatcaggataggggttcaagaggtcacaaggctaggtatgaagcat
ggggagatggaggagatagccaaacttatacgcaaggttctcattgacaaagaggacccg
aagaaggtggcagaacaggtgaaggaattcagaaaacagttcatgaaaatacactacagc
ctcgacgacaaggatgttaggatagacactatagcagacatacttagcctggcccagtag
DBGET
integrated database retrieval system