Apibacter sp. B2966: G8C43_02145
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Entry
G8C43_02145 CDS
T06471
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apib
Apibacter sp. B2966
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apib03032
]
G8C43_02145 (gyrB)
03400 DNA repair and recombination proteins [BR:
apib03400
]
G8C43_02145 (gyrB)
Enzymes [BR:
apib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G8C43_02145 (gyrB)
DNA replication proteins [BR:
apib03032
]
Prokaryotic type
DNA Topoisomerases
G8C43_02145 (gyrB)
DNA repair and recombination proteins [BR:
apib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G8C43_02145 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QII71620
LinkDB
All DBs
Position
complement(506840..508777)
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AA seq
645 aa
AA seq
DB search
MSEQKYTADSIQALEGIEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTIN
VSIGKDNSITVKDNGRGIPVDTNKQTGLSALELVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSTELIATVNRDGKQYQQKYSKGVALTSVEIVGVSTHTGTTVTFIPDSSIFTETI
YNYDTLATRLRELSFLNKGITITLSDEREVDEEGNIRSEEFYSERGLEEFVEFIDENREP
LMDEIIHMEGEIDEIPVEVAMRYNTSYTENIHSYVNNINTHEGGTHLTGFRRALTRTLKK
YADENINLAKEKVEITGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVSSAVDKIVAE
MLTNYLEEHPNEAKQIVQKVLLAAKARQAAKKARELVQRKSPLGGSGLPGKLADCSSRKA
EESELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAVSYKVFESDEIKNIYTALG
VSVGTEEDSKELNLSKLRYHKVVIMTDADVDGSHITTLILTFFFRYMKEMIEKGYIYIAT
PPLYLLKKGNKEYYAWDDKHREEIASQLGNAQGKGFTVQRYKGLGEMNAEQLWDTTMNPE
KRTLRQVTINNASEADRIFSMLMGDDVPPRREFIEKNAVYANIDA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaaaaatatactgcagatagtattcaagcgcttgaaggaattgaacatgta
cgtatgcgtccctccatgtatattggggatgtgggagttagaggattacatcatttagta
tatgaggtagttgacaattccattgatgaggctttagccgggtattgcgatactattaat
gtaagtataggaaaagataattctataacggtaaaagataacggtcgaggtattcctgta
gataccaataaacagacaggattgtctgccttagaattggttatgactaaaattggagca
ggagggaaatttgataaagattcatataaagtttccggtggattgcatggagtgggagtg
tcctgtgtcaatgcattatctactgaattgattgctaccgttaacagagacggtaaacaa
taccagcaaaaatactctaaaggggttgcattaacttctgttgaaattgttggagtttcc
acccatacaggaactacagtaacatttattcccgacagttcaatttttaccgaaactatt
tataattacgatacactagccactcgtcttcgtgaactttcatttttgaacaaaggaatt
actattactttatcagatgaacgtgaagtagatgaagaaggcaacattagatcggaagaa
ttttattctgaaagaggattagaggaatttgtcgaatttatagatgagaacagagaaccc
ttaatggatgaaatcatccatatggagggagagattgatgaaataccggttgaagttgct
atgagatataatacttcgtatacggaaaatattcattcgtatgtaaataatattaatacc
catgaagggggaacgcatttaaccgggtttagaagggcgttaaccagaaccttgaaaaaa
tatgccgatgaaaatattaatttggcaaaagaaaaggttgaaattaccggtgacgatttt
cgtgaaggtttgactgctgttgtttcagttaaagtcatggaacctcagtttgaaggacaa
actaaaactaaattaggtaattcggaagttagttctgctgtagataaaatagttgccgaa
atgttaactaattatctggaagaacatcctaatgaagcaaaacaaattgttcaaaaagtt
cttcttgcagcaaaagcgcgacaagcggctaaaaaagcaagagaacttgtacaaagaaaa
tctccgttaggaggaagcggtttgccgggaaaattagctgattgttcttcacgtaaagca
gaggaaagtgagttattcttagtcgaaggagattcagcaggggggacagccaaacaaggt
agagacagaaacttccaagcgatccttccattgagaggtaaaatacttaatgtagaaaaa
gctgttagctataaagtatttgaaagtgatgaaataaaaaatatttatacggccttaggg
gtatctgttggtacagaagaagattccaaagaattaaacctttctaagctgagatatcac
aaagtggtaattatgaccgatgcggatgtagacggttctcacattacaactttaatatta
acctttttcttccgttacatgaaagaaatgatagaaaaaggatatatttatattgcaacc
cctcctttatatttattgaaaaaaggaaataaagaatattatgcctgggatgataaacat
agagaggaaatagcttctcaattaggtaatgctcaaggtaaaggttttaccgttcaaagg
tataaaggtttaggagaaatgaatgctgaacagctttgggatacgactatgaatcctgaa
aaaagaacgttgagacaagttactattaataatgcatcagaggcagatcgtatattctcc
atgttaatgggagatgatgtaccgcctcgtagagaatttattgaaaaaaatgctgtttat
gcaaatattgatgcttaa
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