Anas platyrhynchos (mallard): 101805286
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Entry
101805286 CDS
T02816
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101805286 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101805286 (DHX8)
Enzymes [BR:
apla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101805286 (DHX8)
Spliceosome [BR:
apla03041
]
Complex C
Other components
Step II factors
101805286 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
PRP38_assoc
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
PhoH
TsaE
AAA_16
Sigma54_activ_2
ABC_tran
Presenilin
Motif
Other DBs
NCBI-GeneID:
101805286
NCBI-ProteinID:
XP_005026168
Ensembl:
ENSAPLG00000002788
EnsemblRapid:
ENSAPLG00030015901
LinkDB
All DBs
Position
28:complement(1734341..1748000)
Genome browser
AA seq
1192 aa
AA seq
DB search
MADLVALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLMK
NGAEFTDSLISNLLRLIQTMRPPSKPTTSKETVVKPKSEKERLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRTKKKRRSRSRSRDRRRRHRSRSRS
RSRTRDRNRGKSRYRSRSRSRSPSRDRRDREKYLEKGSERWRDKHVDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctggtggctctggaggagctcgccaagctcgagtacctgtcgctggtctcc
aaggtgtgcacggagctggacaaccacctgggcatcaacgacaaggatttggccgagttt
gtcataagccttgctgagaaaaacactacgtttgacacatttaaagctgttcttatgaag
aatggtgccgagttcacagattcccttattagtaatttgctccgtctcatacagacaatg
cggcctccatcaaaaccaactacaagtaaagagaccgttgtcaaacccaaatcagaaaag
gaaaggttgaaggagttgtttccagctctttgcaggccggacaatcccaacataaggaat
atgctggatgaagatgatgtgaaagtggcagctgatgcgcttaaagaacttgaagctctg
atgcctagtgcagacaggcaaggcaaacagaggaacagtgaccaccggacaaagaagaag
aggagaagccgaagccgtagcagggacaggagacgaaggcacagatctcgctctaggtct
cgttcaaggactcgggataggaacaggggaaaatccagataccgctcacggagcaggagt
cggagtcctagtagggaccggagggatcgagagaagtatctcgagaaaggcagtgagaga
tggagggacaagcacgtagaccgtcctccacctgaggagccttccatcggagacatttac
aatgggaaagtcacgagtataatgcagtttgggtgctttgtgcagctggaaggactaagg
aagcgttgggagggcttggtccacatctcagagcttcgaagagaaggacgggttgccaac
gttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttatcctttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagatactggggaagacttgaatcca
aaccggaggaggaacctggttggagaaaccaatgaagaaacttcaatgagaaacccagac
agacccagccatctgtccctggtgaatgccccagaggtggaggatgacaccctggaacgg
aaacgcctcacccgaatttcagacccagagaaatgggaaataaaacagatgattgcagct
aatgtgctttctaaggaagagtttcctgactttgatgaggagactgggattcttcctaaa
gtcgatgatgaagaagatgaggatcttgagattgagttagttgaagaagagccacctttc
cttcgtggtcatactaaacaaagcatggatatgagtcccatcaaaatagtaaagaatccg
gatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaagaaagacgagaa
cttaaacaagcacaaagagaagcagagatggattctattcccatgggtctcaacacacac
tgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagcc
tcttatggtaagaagacacagctttctatcattgagcagagagagagtctcccaatcttc
agactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttattgga
gagacagggtctgggaagacaacccagattacccagtacctggctgaggcgggatataca
tcaagaggaaagatcggatgtactcagcctcgcagagtggccgcgatgtctgttgcaaag
agggtgtcagaggagttcggttgctgtttgggacaagaggttggctacaccattcgattt
gaagactgcactagccctgaaactgtcatcaaatacatgacagatggtatgttactgagg
gagtgcttgatagatcctgatctgacccagtatgccattatcatgctggatgaagcccat
gagaggacaattcatacagatgtgctctttggactcctgaagaagacggtacagaaacgg
caggatatgaagttgatagtgacgtcggcgacactggatgctgtgaaattctctcaatat
ttctatgaagctccaatcttcacaattcctggcagaacatacccagtagaaatcctgtac
acaaaagagccagagacagattatttggatgctagtctgattacagtaatgcagatccac
ttaacagagccaccaggtgacatcttggtatttctaactggtcaggaagagatcgacact
gcctgtgagatcctctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctgccagtatattcagctttacccagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggttgtcattgccactaacattgctgagacatcacttactatt
gatggaatatattatgtggttgatcctggctttgtgaagcagaaagtttacaactccaaa
actggaatcgaccagctggttgttacaccaatttcacaggctcaagcaaagcagcgagca
ggaagagctgggagaacagggccaggaaaatgctataggctgtatacagagcgtgcctat
cgagatgaaatgctaaccaccaatgtgcctgaaatccagagaacaaatttggccagtaca
gtgctctccctgaaggccatgggcatcaatgatttgctctcctttgactttatggacgca
cccccaatggaaactctcataactgccatggagcagctgtacactctgggagctctggat
gatgaaggacttctcactcgacttgggcgcaggatggcagaattccccttggagcccatg
ttgtgcaagatgttgatcatgtctgtacatctgggatgcagcgaggaaatgctgaccata
gtctccatgctgtctgtacagaatgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaagttccaccagacggaaggagaccacctcactctgctggctgtc
tacaattcctggaagaacaataagttttcaaatccctggtgctatgaaaattttatccaa
gcccggtccttacgcagggcacaggacatccgcaagcagatgttgggcattatggacaga
cacaagctggatgtggtgtcctgtggcaaggcaacggttcgagtccagaaggccatctgc
agcggtttcttcagaaatgctgcaaagaaggatccccaggagggttatcggacactcatt
gatcaacaggtggtctatatccacccatccagtgctctcttcaacagacagcccgaatgg
gtggtgtatcatgagctagtgctgaccaccaaggagtacatgcgtgaagtgacaactatt
gacccacgctggctggtggaatttgcaccagcattcttcaaggtttctgatccaaccaaa
ctgagcaaacagaaaaagcagcagcggcttgaacccctctacaaccgctacgaggagccc
aacgcttggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
