Ancylobacter polymorphus: K9D25_11585
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Entry
K9D25_11585 CDS
T08152
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
apol
Ancylobacter polymorphus
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apol03021
]
K9D25_11585 (rpoH)
Transcription machinery [BR:
apol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9D25_11585 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Sigma70_r4_2
HTH_19
HTH_11
KORA
HTH_23
HTH_Crp_2
GntR
HTH_7
PgaD
HTH_20
HTH_28
DUF3431
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UOK69402
UniProt:
A0A9E6ZSN0
LinkDB
All DBs
Position
2460422..2461333
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AA seq
303 aa
AA seq
DB search
MARSAMSLPSAEGGLSRYLAEIRRFPMLEPQEEYMLAKRWREHEDPDAAHRLVTSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLATYAMWWIKASIQEYILRSW
SLVKMGTTAAQKKLFFNLRKAKSQISALEEGDLRPDQVQQIATKLGVTEQEVIEMNRRLG
GDASLNSPLRGDVEGGGEWQDWLADDRDSQESVLVEHEEMDNRRSALSGALSVLNERERR
IFEARRLSDDPMTLEDLAAEFGVSRERVRQIEVRAFEKVQKAVIDRVHQMETAPMRQDHS
PAM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttccgctatgagcctaccgtccgccgaaggtggcctgagccgctacctcgcg
gaaatccgccggttcccgatgctggagccgcaggaagaatatatgctcgccaagcgctgg
cgcgagcatgaggatcccgacgccgcgcatcgtctcgtcaccagccatctgcggctcgtg
gccaagatcgccatgggctatcgcggctacggcctgccgatctccgaggtgatctcggag
ggcaatgtcggcctgatgcaggcggtgaagcgcttcgagccggacaagggcttccgcctt
gccacctatgccatgtggtggatcaaggcctcgatccaggagtacatcctgcgctcgtgg
agcctggtgaagatgggcaccacggcggcgcagaagaagcttttcttcaacctgcgtaaa
gcaaagagccagatttcggcgctggaagagggggatcttcgtcccgaccaggtgcagcag
atcgcgaccaagctcggcgttaccgagcaggaagtgatcgaaatgaaccgtcgtcttggc
ggagacgcgtctctgaactcgcctcttcgcggagatgtcgaggggggcggggagtggcag
gactggctggcggatgatcgcgacagtcaggagtccgttctcgtcgagcatgaggagatg
gacaaccgccgcagcgcactctcgggcgcgctttccgtgctcaatgagcgcgagcggcgc
atcttcgaggcgcggcggctgtccgacgacccgatgacgctggaagacctcgccgccgag
ttcggcgtgtcgcgcgagcgtgtgcggcagatcgaggtgcgcgccttcgagaaggtgcag
aaggcggtcatcgaccgcgtgcaccagatggagacggcgccgatgcggcaggatcattcc
cccgccatgtga
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