Ancylobacter pratisalsi: G3A50_05245
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Entry
G3A50_05245 CDS
T06476
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
apra
Ancylobacter pratisalsi
Brite
KEGG Orthology (KO) [BR:
apra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apra03021
]
G3A50_05245 (rpoH)
Transcription machinery [BR:
apra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3A50_05245 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_19
Sigma70_r4_2
HTH_11
KORA
HTH_Crp_2
HTH_7
LysM
PgaD
GntR
UCR_14kD
DUF3431
Motif
Other DBs
NCBI-ProteinID:
QIB33175
UniProt:
A0A6P1YJ65
LinkDB
All DBs
Position
1062080..1062991
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AA seq
303 aa
AA seq
DB search
MARSAMTLPSAEGGLSRYLNEIRRFPMLEPQEEFMLAKRWREHEDSEAAHRLVTSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLATYAMWWIKASIQEYILRSW
SLVKMGTTAAQKKLFFNLRKAKSQISALEEGDLRPDQVQQIATKLGVTEQDVIDMNRRLS
GDASLNAPLRGDAEGGGEWQDWLADDHDSQESILAESEELDNRRSALAGALSVLNERERR
IFEARRLSDNPMTLEDLASEFGVSRERVRQIEVRAFEKVQKAVVDRVHQLETAPAAPQAL
PVH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttccgccatgaccttgccgtccgccgaaggcggcctgagccgttatctgaac
gagatccgccggttcccgatgctggagccgcaggaagagttcatgctcgccaaacgctgg
cgcgagcacgaggattccgaggcggcccaccggctcgtcaccagccatttgcgcctcgtt
gccaagatcgccatgggctatcgcggctatggcctgccgatttccgaggtcatctcggaa
ggcaatgtgggcctgatgcaggcggtcaagcgcttcgaaccggacaagggcttccgcctc
gccacctatgccatgtggtggatcaaggcctcgatccaggagtacatcctgcgttcgtgg
agccttgtgaagatgggcaccacggccgcgcagaagaagctgttcttcaatctgcgcaag
gccaagagccagatctccgcgctggaagagggcgatttgcgtcccgaccaggttcagcag
atcgccaccaagctcggcgttaccgagcaggacgtgatcgacatgaaccgtcgcctttcc
ggcgacgcctccctgaacgcgccgctgcgcggggatgccgagggaggtggcgagtggcag
gactggctcgccgacgatcatgacagccaggaatcaatcctggcggaaagcgaagagctg
gataaccggcgaagtgcgctggccggcgcgctctcggtgctcaacgagcgtgagcggcgc
atcttcgaggcccggcggctgtcggacaacccgatgacgctggaggatctcgcctccgaa
tttggcgtgtcgcgcgaacgcgttcgccagattgaggtccgcgctttcgaaaaggtgcag
aaggcggtcgtcgaccgcgttcaccagctggagacggcaccggcagcgccgcaggccctg
ccggtccattga
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