Auxenochlorella protothecoides: F751_1507
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Entry
F751_1507 CDS
T04132
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apro03016
]
F751_1507
Enzymes [BR:
apro01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
F751_1507
Transfer RNA biogenesis [BR:
apro03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
F751_1507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
23612898
NCBI-ProteinID:
XP_011398789
UniProt:
A0A087SJI9
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MEERRIASLEVQEGRGYVWDAAGFKQQNAVHGLPLELKWVRLQPVLRTSAAAADAASAAL
ARKRAHESESDGSDEEAGPRAVEGSSEAPAWREALARGSHFCIPTRAAARDPGEAVSVLP
AWTFPATPGERQRYAVFKDLLSRGFRVTGGSKFGADYLVYPGDPTLFHAQFCVRLMDYSA
PLLPALLAAACRASHQARKHLLVASLLDGGKVSYTTFGPVDGFG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgtaggatcgcctccctcgaagtgcaggagggccgtggatacgtctgggat
gcagcagggttcaagcagcagaacgctgtgcatgggcttcccctggagctaaagtgggtg
cggctgcagccggtgctcaggaccagtgctgcggcagcggacgccgccagcgccgcactt
gcgaggaagcgggcgcatgagagcgagagtgacggcagcgacgaagaggccgggccacgg
gctgtggagggcagcagcgaggcgcctgcctggagggaggcactggcccgcggatcgcac
ttttgcattcccacccgcgcagcggcgcgtgaccccggtgaggccgtgtccgtcctgccc
gcttggaccttcccagcaacgccaggggagcggcagcggtatgcggtattcaaagacctg
ctgtcgcggggcttccgtgtgacggggggctccaagtttggagcagactacctggtatac
cccggcgatcccaccctgttccacgcccagttctgcgtccggttgatggactactctgct
cccctgctgccggccctgctggcggctgcgtgccgtgcctcccaccaggcccgaaagcac
ctgctcgtcgcgtcgctgctggacggcgggaaggtcagctacaccacctttggacccgtg
gacggttttggctga
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