Auxenochlorella protothecoides: F751_6661
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Entry
F751_6661 CDS
T04132
Name
(RefSeq) Vacuolar protein sorting-associated protein 13D
Organism
apro
Auxenochlorella protothecoides
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chorein_N
VPS13_ext_chorein
Motif
Other DBs
NCBI-GeneID:
23618052
NCBI-ProteinID:
XP_011399642
UniProt:
A0A087SLV0
LinkDB
All DBs
Position
Unknown
AA seq
2670 aa
AA seq
DB search
MVFEGWVVDHLSAWLGHFFDLQRDQLRISLWRAWQTGVTLENIPIRLDALEYLQLPFRLT
AGNIGRLQLQIPWQALRSPLILEVADARLEACLRGPEELWQEPAEARAWAGKEARLAGVE
ASALAGPEGAQESATAVPAPSQGSTGLLWGALSSLASFLVNRLQIRFTNVSLVLRDPGTG
LGVEVRLPSVHTCSPSVALRMLGAALDEALGQEGDDPGMVHKDVALAAVSVWLLQGEPGV
GTDANGWGEVGATSLGIDPTQAPLGPLPLLPPCDGVLHLGTTAALSNGTLRADCTLTLPS
LRLSLSDATLAGVVCLADAAERVSRQNRAALFCPASWRLKSGGREGFARRMWVFALNGVL
RSDARWDAGVTAWVPAHKRAERRKRYIRLYRAVLERPVQPAAGVGAAKGSGGSDDAVEEP
CCSMLEAAERKLCLPDITLCRAVAARMAAASLAKAAAAAKRKKTGPKAVPSPGQLLLAAA
GPASDEKGLIGADLAPAGLRGAAMPEEGAPPTRDDTRTEEGLSVPPADAMTAASALATAA
AGSVPEAALRPGNPGSELPRPGAEGDGVPVSVGTPEQVLALSTRPVSPHAAARRGVVSRG
VSAMAGFFGALPRRAGYAQEEAARLLAAMEVDTVDESREVSHHGAAGLRASLRLRIPAAS
LALAARGRSLALLEAQGLRAAAAYDLAGAELAASLSCTRVRLFDCGAGAPQSLLLCGAGA
DEGGAFDPGPARGAALTVRYRAAADTALGWRGAEALGRARLAGLGPPVAWSVQLAGVDAR
LALGARRCLLLSAGQLAARSTAAVVMGEASDAGVDDADFLDQQRGVGPSHATAASVPWRW
SVRRVALIVQEWEEGGAVFRPTQPPVLQPTTMQGDLCLPRTPNVKAPALSIEARGWSFSL
GTRLLAEIQAALQVPTQARAPPVQGMQGASGGALGDAGAVPPLAAGRDAGGVLGLALGAS
GEANLGASLLDLTLQDQTAPGSGLLPPPVVDRGAWRVSPRVTLARLDLDFSRDAGAAPRT
ATTVRLHDAASAAYRDEPGNFIARLHRGRPNAGVITVVESAAHLHVGVALNNVLLGHAAL
MRILLLTLPDTGVGPEEVVGSVAEDALRGGAGGGVDVGGTEVAPAPRHSTAAPAQTLPVQ
SESFTLDLEECVAEWRYQPGGTAAARLAPAALDFLLTHGVLGVLEAPRCVLRFPLDEPGE
RVALRGAALSCAALGVGGRALLPLLRLPEVALTVERAGGGAPPRLTLGARDVLAGLHPSQ
ITMAAAAAELFAAELAALRRPNLLDLPASSSDGARLGAESSSPRSMSDLLGVAQARTPLT
LAARMEPGSPAAPVATPSLGRVPLVADGTTPIATHQPPQPPRWLLSLEACSARLTIAEVR
LQLLGPNVSCAGLEGRWRRIEVVLDGAPGPGARRRLELGFETLDVSLLRPLPDQATPFAA
AAALRVSSDGRRSNGGGVASPEGEEEAGGAWQSGPGSGWDRGIESHAGWASPPEVTESTN
QFPADASDEGEVFYEALSRSQRRSSAGTSAAASRYFSAGGSVDSEGASTLQLDPGPAWVE
EGGAESPLGPSPRIASPPPLATRCTAALHARLARDILIGGEMTLVVPVLAVHATADVGAW
EEAAACVLNHVGLMGGALPDLRASVTAEENSAGGDAGDPVGTSEPGDTGPSTAYPLRWHV
RCACLRATLVCNAEESGPGSAPPSPFHSVRMADRHSGEVQSWRGPILALTLQASLEAEAR
VGADVGLAAVTKTEAGAIADAAPEAAWWLQLRVPGLLLSAGLGSAVSDAEEREHGAAPSL
SLGAGLAGIAGFELRCVGPVAPRPDGPDRQALPVLDAEPIAKEEEGQAPGAALLTSIVSS
AQSAEPPGPTPQSPEEPPGSSAHAVQVDLALARGSGDAKALTAWELRARAGILAVLVGVG
GVDGVGRGRCPLLQAAAHDLKACAGSGTATAQLGCRLEVRSWAPQLAGWEPVVEPWRSYA
FLSTLTLAGAGEAVRAAQAAAGEPALAGGWTLVNATGASVELWMGGLVGGGAAEAGPVGW
SGTSGRRDMIAPERPHLTVIPGERVDLPVWPGSDDTLADLAAGYAGYPDPMLGVRPAGWR
GDMTGCSPDPSDPPCPPRHTRVYFRGPGGTAGCVPLAAPGTHAYGGPWPGAGGQVPGSRG
DGAPQPRVLASVARGPDPWAGTSVVLHSGLRLVNRGGVALEVRLHTPLGFVAEASPRASL
GALQPGQGLWLPVQHALLSALSFRPLAVGGCHGAGHDGHHQGGTHGGTVSRTGSGVLFSQ
AGPGAALARHPPLHPPVVAAGSTIGGPPPAPALLARRSLDRARSFGASGPLEWSESVPVS
QLVGGARAGAAAAGTFQLTCRQAPGSPGLDAPLALCVGSQRLAREFEETPPRDERTWPLP
APSDPSGALAIVVGAPLMLLNSLPVPVEVGVGGQQWTLGPLQRRALHGLEEARAQRLRLR
PAGYAPVEAALLSPAMLGALGAEAAERQEEIEVVELPPHPSSSGPTGPGAQQAVRWVRDT
PLQLVEVGQSGHSVGVVLRHGLDPGSGARVLRLTCTLWIFNCTGQPLALRQAHEDAGHFT
EAERAAAAEDRAWLAPLALPPELLRPRGPPSVTASAAGPPTRSPMLLSPARGEAASSMRL
NSATSSLAPLSRAASSVDVGVAGGARVVVV
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaggggtgggtggtggaccacctgtccgcatggctgggccacttcttcgac
ctccagcgcgatcagctgcgcatcagcttgtggagggcctggcagacgggcgtgactctg
gagaacatccccatccgcttggatgccctggagtacctccagctgccgttccggctcact
gcggggaacataggccggctgcagctccagatcccctggcaagcgctgcgctcccccctg
atcctggaggtggcggatgccaggctggaggcgtgcctcagggggccagaggaactgtgg
caggagcccgccgaggcccgagcctgggccggcaaggaggcgcgactggcaggggtggag
gccagcgccctggctgggccggaaggcgcccaagaaagcgcgacggcggtccctgcccct
tcccagggctccacgggcctcctctggggggcgctgtccagcctggcctccttcctggtc
aaccgcctccagatccgattcaccaatgtcagcctggtcctcagggaccctggcacgggg
ctgggggtggaggtgcgcctgccctccgtgcacacatgctcgccgtctgtcgcgctgcgc
atgctgggcgcggccctggacgaggcactggggcaggagggcgacgaccccggcatggtg
cacaaggacgtcgccctggcggccgtctctgtctggctcctccagggggagcctggcgtg
ggtacggacgcaaacggctggggggaagtgggcgccaccagcctcggcatcgaccccaca
caggcccccctgggacccctccccctgctgccgccctgcgacggcgtgctgcacctgggc
accaccgccgcgctttccaatggcacgttgcgcgccgattgcacactgacgctgccctcc
ctgcgcctgtcgctgagcgacgcgacgctggcaggggtggtgtgcctggccgacgccgcc
gagcgggtctcgcgccaaaatcgggcggccctgttctgccccgcctcctggcgcctgaag
tctgggggacgcgaggggtttgccaggcgcatgtgggtctttgcgctgaatggcgtgctg
aggagcgacgctcggtgggacgcgggcgtgacggcgtgggtgccggcgcacaagcgtgca
gagcgccggaagcggtacatccggctgtaccgcgcggtcctggagcggccggtgcagccg
gctgcaggagtgggcgctgcaaagggaagcggcggcagcgacgacgccgtcgaggagccc
tgctgctccatgctggaggcggcggagaggaagctgtgcctgccggacatcaccctctgc
cgcgccgtggcggcacgcatggcggccgcgtccctggccaaggccgccgcagccgccaag
cgcaagaaaacggggccgaaggccgtcccctcccccggacaacttctccttgcagcggcc
gggcctgcgtcggatgagaaagggctgattggggctgatctggcgccggctggactcagg
ggcgccgccatgcccgaggagggcgcccctccaacaagagacgacacacgcaccgaggag
gggttgtctgttcctcccgctgatgcgatgacggctgccagcgccctggccacagccgct
gctggcagcgtgccggaggccgcactgcgccccggcaaccccggctcggagctgccgcgt
ccgggtgcagaaggcgacggcgttcccgtttcagtgggcacgccagagcaggtgctcgcg
ctctccacccgccccgtgtccccgcacgctgcggctcgccggggcgtggtctcgcgcggc
gtgtctgccatggcgggcttcttcggcgccctacctcgacgagcgggctatgcacaggag
gaggccgcccgcctgctggcggccatggaggtcgacaccgtggatgaatcacgcgaggtt
agtcatcatggggccgcgggtttgcgagcctccctgcgcctgcgcatccccgccgcctcc
ctcgcgctggcggcccgcggccgcagcctggcgctgctggaggcccagggcctgcgggcg
gcggcggcctacgacctggccggcgccgagctcgcggcctccctctcctgcacgcgcgtg
cggctcttcgactgcggcgccggcgcgccgcagagcctgctcctctgcggcgctggtgcg
gatgagggcggcgcttttgacccaggaccggccagaggcgccgcgctgaccgtgcgctac
cgcgcggcggccgacacggcgctgggctggcgtggcgccgaggcgctgggccgcgccagg
ctggcggggttggggcctcccgtggcctggtccgtccagctggcgggggtcgacgccagg
ctggcgctcggcgcccggcggtgcctgctgctcagcgccgggcagctggccgcccggagc
actgctgcagtggtgatgggcgaggcaagcgatgcgggtgtcgacgacgcagattttttg
gatcagcaacgtggggtcggtccctcgcatgccacggccgcaagcgtcccgtggcgctgg
agcgtgcgccgcgtggcgctgatcgtgcaggagtgggaggagggcggggcggtgttccgc
cccacccagccgcccgtactgcagccgacgaccatgcagggggacctctgcctgccgcgc
acccccaacgtcaaggcccctgcgctgagcatagaggcccgcggctggagcttcagcttg
ggcacccgcctgctggccgagatccaggcggcgttgcaggtgcccacccaggccagggca
cctccggtccagggcatgcagggtgcgagtggcggtgcgctcggcgacgcaggcgccgtg
ccgccgctggccgctggcagggatgccggcggcgtgctaggcctggccctgggagccagc
ggcgaggcgaacctgggcgcctcgctcctggaccttaccctgcaggaccagacggcgccg
gggtccggattgctgccccctcccgtggtggaccgcggcgcatggcgcgtgtcgccgcgt
gtgaccctggcgcggctcgacctggacttctcccgcgacgctggcgctgcgccacgcacg
gccacgacggtgcgcctgcacgacgcagcgtcggcggcctaccgcgacgaacccgggaac
ttcatcgcccgcctgcaccgcggccgtcccaacgccggtgtgatcacggtggtggaaagc
gcggcgcacctgcacgtcggcgtggcgctgaacaacgtgctactgggccacgccgccctc
atgcgcatcctcctcctcaccctgcccgacacgggtgtggggcccgaggaggtggtgggg
agtgtggccgaggacgcgctgcgaggaggggcgggagggggcgtcgacgttggggggaca
gaggtcgcccctgcgccccgccacagcacggccgcacccgctcagacgctgcctgtgcag
agcgagagcttcacgctggacctggaggagtgcgtggcggagtggcgataccagcctggg
ggtaccgcggccgcgcgcctggcccccgccgcgttggacttcctcctcacgcacggcgtg
ctgggggtgctggaggcgccgcgctgcgtcctgcgcttcccgctggacgagccgggcgag
cgcgttgcgctgcgcggcgccgcgctgtcctgcgccgcgctgggcgtgggcggccgcgcc
ctgctccccctcctgcgcctgcccgaggtcgccctgaccgtggagcgcgcgggcgggggg
gccccgccgcgtttgaccctgggcgcgcgcgatgtgctcgccggcctgcaccccagccag
atcaccatggcggcggcggccgcagagctgtttgctgccgagctggcggcactgcggcgc
cccaacctcttggacctccccgcctccagctcagatggcgcacgcttgggggccgagagc
tcgagcccccggtccatgtcggacctgctgggggtggcacaggcccgcaccccgctcacg
ctcgccgcaaggatggagccaggcagccccgctgcgccggtcgccactccgagcctggga
cgggttcccctggtggcagatggcacgacacccatcgccacccaccagccgccccagccg
ccgcgctggctgctgtctctggaggcctgctccgcgcgcctgaccatcgcagaggtgcgg
ctgcagctgctgggccccaatgtgagctgcgcggggctggaggggcgctggcgccgcatc
gaggtggtgctggacggcgcgcctggccccggcgcccgccgccggctggagctcggcttc
gagaccctggacgtgagcctgctgcgcccgctgccggaccaggccacgccctttgcggcg
gccgcggcgctgcgagtcagctccgacgggcggcgcagcaatggtgggggcgtcgcgtcg
ccggagggcgaggaggaggcgggcggggcatggcagtcggggccgggcagcggatgggac
cgcggcattgagagtcatgccggctgggcgtctccgcccgaggtgacagagtccaccaac
cagttcccggcggacgccagcgacgagggcgaggtattctacgaggcgctgtcgcggtcg
cagcgacgctccagcgccgggaccagcgccgccgccagtcgctacttcagcgcgggcggc
agtgtggacagcgagggggcgagcacgctgcagctcgaccccggccccgcctgggtggag
gagggcggggcggagagtcccctgggccccagcccacgcatcgccagccccccgcccctc
gccacgcggtgcacggccgcgctgcatgcccgcctggcgagggatattctgatcggcggc
gagatgaccctggtcgttcctgtcctcgccgtccacgccacggccgacgtcggggcctgg
gaggaggccgccgcctgcgtgttgaaccacgtggggctgatgggcggcgcactgcccgac
ctccgtgcgtcggtgactgcagaggagaacagcgccgggggcgacgcgggcgacccggtc
ggcacgagcgaaccaggcgacacagggccctccacggcctaccccctgcgctggcacgtg
cgctgcgcctgcctgcgcgcgacgctggtgtgcaacgccgaggagtccggcccggggtcg
gccccgccctcgccgtttcacagtgtgcgaatggcagacagacactctggcgaagtccag
agctggcgggggcccatcctcgcccttacccttcaggccagccttgaggcggaggcgagg
gtgggagcggacgtgggactcgctgcggttacgaaaacggaggctggggcaatcgctgat
gcagcgcccgaagcggcgtggtggctgcagctgcgtgttcctgggctgctgctgagtgcg
ggcctgggctctgcagtttctgatgcagaggagcgggagcatggcgccgcgccgagcctc
tcactcggcgcggggctggcggggatcgccggcttcgagctgcgctgtgtcgggcctgtt
gctccccgcccagacggcccggatcgccaggcgctgccagtgctggatgctgaacccatc
gccaaggaggaggaaggccaggcaccgggcgctgctctactcacgagcatcgtatcatca
gcacagagcgcggagcctccggggccgactccgcagtcccccgaggagccgccggggtca
tcggcgcacgccgtgcaggtggatctcgcgctggcgcgtggctcgggtgatgccaaggcc
ctcaccgcctgggagctacgtgcccgagcgggcatcctggctgttctcgtcggggtcggg
ggcgtggacggcgtggggcgcgggcgctgccccttactccaggcggcggctcacgacctg
aaagcgtgcgccggctccgggactgccacggcgcagctgggctgccggctggaggtccgg
agctgggcgccgcagctggccggctgggagccggtggtcgagccgtggcggtcctacgcc
ttcctctccaccctgaccctggcgggtgcgggggaggcggtgcgcgccgcgcaggcagct
gcgggggagccggcgctggcggggggctggacgctggtcaacgccacgggggcctcggtg
gagctgtggatgggggggctcgtcggcggaggtgccgccgaggccggccctgtgggttgg
tcgggcacgtcgggccggcgagacatgattgctcccgagcggccccacctcacggtgatc
ccgggtgagcgcgtggacctccctgtctggcccggctccgatgacaccctggctgacctg
gcggccgggtacgctgggtaccctgaccccatgctgggcgtgcggccggcaggatggcga
ggcgacatgaccggatgctcacccgacccctctgacccaccctgcccgccacgccacacc
cgggtgtacttccgcggcccgggcggcacggcgggttgcgtgcccctggccgcccccggc
acccacgcgtatggcgggccctggcctggcgcaggtggccaggttccggggtcgcggggg
gatggcgccccccaaccccgcgtgctggccagcgtggcgcgcggccccgacccctgggcc
ggcacctctgtggtgctgcactctggcctgcgcctggtcaaccgcggcggcgtggcgctg
gaggtgcggctgcacacgcccctcggcttcgtggctgaggccagcccccgggccagcctg
ggcgcgctgcagccgggccagggcctgtggctgcccgtgcagcacgcgctgctgagcgcg
ctgagcttcaggcccctggctgtcggtggttgtcacggtgccggccacgacgggcatcat
caaggcggtacgcatggcggtaccgtcagccgcaccggatcgggcgtgctcttctcgcag
gcggggcccggtgcagccctggccaggcacccccccttgcacccccccgtggtggctgcc
ggttcgacgatcggcggcccaccccccgcgccggcgctcctggcgcgaaggtcgctcgac
cgcgccaggagctttggtgccagtggcccgttggagtggagtgagtcggtccccgtctcg
cagctggtgggaggggccagggcgggcgcagccgccgccggcaccttccagttgacgtgc
cgccaggcgccgggctcccccggcctggacgccccgctggccctctgcgtcggctcccag
cgcctggcccgggagtttgaggaaactcccccgcgcgatgagcgcacgtggccgctgccc
gccccctctgaccccagcggcgcgctggccatcgtggtgggcgcccccctcatgctcctc
aacagcctgcccgtgccggtggaggtgggcgtgggcggccagcagtggaccctgggcccc
ctccagcgccgcgccctgcacgggctggaggaggcgcgggcgcaacggctgcgcctgcgg
cccgccggctacgcgcccgtggaggcggccctgctctcgcccgccatgctgggcgcgctg
ggcgccgaggccgctgagcgccaggaggagatcgaggtggtggagctgcctccccaccct
tcttcctccggccccaccggcccgggggcccagcaggcggtgcggtgggtgagggacacc
cccctccagctggtggaggtggggcagagcgggcacagcgtgggcgtggtcctacgccac
ggcctcgacccggggagcggggcgcgcgtgctgcgcctgacctgcacgctctggatcttc
aactgcacggggcagccgctggcgctgcggcaggcgcacgaagacgccggccacttcacc
gaggccgagcgggcggccgccgcggaggacagggcctggctcgcgcccctggcccttccg
ccggagctcctccggccgcggggcccgccgagcgtgaccgcctcggctgcggggccgccc
acgcgctcccccatgctcctctcgcccgccaggggggaagccgcgtcgagcatgcgcctg
aactcggcgacctcctccctcgcgcccctcagccgcgccgcctcctcggtggacgtcggg
gtcgcgggaggtgcgcgggtggtcgtggtctga
DBGET
integrated database retrieval system
