KEGG   Lancefieldella parvula: Apar_1359
Entry
Apar_1359         CDS       T00983                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
apv  Lancefieldella parvula
Brite
KEGG Orthology (KO) [BR:apv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apv03400]
    Apar_1359
Enzymes [BR:apv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Apar_1359
DNA repair and recombination proteins [BR:apv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Apar_1359
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD
Other DBs
NCBI-ProteinID: ACV51783
UniProt: C8W8J2
LinkDB
Position
complement(1533427..1536363)
AA seq 978 aa
MELAERAEHESFDVLEDDIVVLDTETTGLSFKKCSLIEISAAKLSGREIIERFQTFVDPG
CPIPEEITTLTSITDEDVKGAPSAKEAVAALAEFVGGLPVLAHNATFDRTFIERVPGGTS
VSDTWIDTLSLSRIALPRLSSHKLSSMAEAFGTMKVTHRASDDVDALCGMWRILLLGLMN
LPRGLLAKLASMHDNVEWKFRPIFSYLSQIKEKEVVQRGIARKDATGAELADAEISGTFF
SLKDIRSQLVADAKTKARRDADDPETPAMLPISKDEIHRAFAKPGVVSQMYDKFETRSEQ
VSMSVEVRNALVTSSHRELEAGTGIGKSIAYLLPEALFAQKNDVTVGIATKTNALTDQLV
THDLPALARALPNGLSFCSLKGYEHYPCLHRVDRAALEELPLTLIDQEGRSSNSVASDML
TAIAVIYAYACQSADGDLDALGIRWRSVPREMVTIKAAECLRSKCPYYPHECFVHGARKR
AGSSDVVVTNHSLLLRNVAADGKILPPIRHWVIDEAHGFEAEARHQWAIEISAKEMRNGF
ELLGGIKSGAIHAAMVGAANLEDSTLLTGLLTRSAAAVQRAMAAMGNLMVAVHELAPLAK
SDGGYNSLQLWINDEVRETKEWKEFLETASVALSALEEAALRIGKTTEALTASAPNLASN
LSESGMFLSTLLESLKLICDGTDKSYVYSAKLTRLKRDIGSEALVAEKLDIGAELAEKWL
PETHSVVFTSATIAVGDDFSHFEHAVGLDRGSFEHKSLHLDSSFDYENHMGVFVAEDMPT
PTDPGYLDALEKLLFDVHVQMGGSVLTLFTNRRDMERLYEALEPRLSEYGLTLACQERSS
SARRIREKFLAEKNLSLFALKSFWEGFDAAGDTLRCVVIPKLPFASPNEPLVKEREVRED
RAWWRYSLPEAVIATKQAAGRLIRSAEDKGVLVLADSRLVSKRYGSSFLKSLPNKNYQCV
STKNISGQIAKWREEHDA
NT seq 2937 nt   +upstreamnt  +downstreamnt
ttggagcttgcagagagggctgagcatgagtcgtttgatgtcttagaggatgatattgtt
gttttggatactgagacaacaggtttgtcctttaagaaatgctcccttattgagatttct
gctgccaaattgagcggaagagagatcatagagcgctttcagacttttgttgatcctgga
tgcccaattccggaagagattacaaccctgacttcaatcaccgacgaagacgttaagggc
gcgccaagtgcaaaagaagccgttgctgcacttgcagagtttgttggcggacttcctgtt
ttggctcacaacgccacttttgaccgtacgtttattgaacgagtgcccggcggaacttcg
gtctccgatacttggattgatacgctgtcactctcacgtatagcgctaccgagactctct
tcgcacaagctgtcgagcatggctgaagcgtttggcaccatgaaggtcacgcaccgcgca
agtgacgacgtagacgccctttgcggcatgtggcgtatcttgcttttgggacttatgaat
ctgccccgcggtcttctcgccaaactggcatcaatgcacgataacgtggagtggaaattc
aggccaatcttttcgtatttgtcgcagataaaagaaaaagaagttgttcagcgtggcatc
gcaaggaaagatgcaacaggtgcagaacttgcagatgcggagatttcgggcacgtttttc
tcgcttaaggacattcgtagtcagcttgttgcagatgcaaaaacaaaggcgagaagggac
gcggacgacccagaaacgcctgctatgctgccgatttctaaagacgagattcacagggcg
tttgctaaaccgggcgttgtctcacagatgtatgacaagtttgagacgcgcagcgagcag
gtaagcatgtctgtcgaagtcagaaacgctctggtaacttcatcgcatagagaacttgaa
gcaggaaccggtattggcaagtcgattgcatacctgttgcctgaggcgttatttgcacag
aaaaatgatgttactgtaggtattgctacaaaaacgaatgcgctgaccgatcagcttgtt
actcatgatctccctgcacttgcaagagcgctgccaaatgggctgagtttttgtagctta
aaaggatacgagcactatccatgcttgcaccgtgttgatagagcagctcttgaggagctg
ccgttgacgttgattgatcaggaaggccgttctagcaatagcgttgcgtcagatatgctg
accgcaattgcagtgatttacgcgtatgcgtgtcagtcggccgatggtgacttggatgca
ttgggtattcgttggcgctcggttccgcgagaaatggtgactattaaagcagcagagtgc
ctacgctcaaagtgcccatattatcctcatgagtgttttgtccatggagctcgaaagcgc
gcaggatcttcagatgttgtggtgactaatcactctctgctactaagaaatgttgctgct
gacggcaaaattcttcctcctataaggcattgggtcattgacgaggctcatggatttgaa
gccgaggctcgccatcaatgggcaatagaaatttctgctaaggaaatgagaaacggcttt
gagctgcttggaggaattaagtccggggctattcacgctgctatggtgggcgccgccaat
cttgaagattctacgctgcttactggtcttctcacacgttctgctgctgcagttcaacgg
gctatggcagcaatgggcaacctcatggttgccgtgcatgaactggctccgttggctaaa
agtgatggtggctataattcccttcagctttggattaacgatgaagtgagagaaacaaag
gaatggaaagagtttttggagaccgcttctgttgctctttctgctcttgaagaagcagca
cttagaataggaaagaccaccgaggctcttactgcatcagctccaaaccttgcgagcaat
ttgagcgagtcgggaatgtttcttagcacccttctggagtcattgaagcttatttgtgat
ggaacggacaagagttacgtctattcggcaaagttgactcgactaaagcgtgatattggc
tctgaagcccttgtggccgagaagcttgatattggagcagagttggcggaaaagtggctt
cctgagacgcattccgttgtatttacttcggcaactattgctgttggagacgatttttct
cattttgagcatgctgttggtctggataggggttcctttgagcacaagagtttgcattta
gactctagctttgactacgagaatcacatgggcgtctttgtggccgaagatatgcctaca
ccaactgatccagggtatttggatgctctggaaaagttgctgtttgacgtccatgttcag
atgggcggttcggtgttgacgctctttactaacaggcgcgatatggagcgtctttacgaa
gcgctggaaccacgtttgagcgagtatggcctcactcttgcttgccaggagcgatcttct
tccgcacggcgcattcgtgaaaagttcctagccgaaaagaacctctcgctgtttgctctt
aaatcattttgggagggatttgatgctgcgggggacacgcttaggtgcgtggtgatccct
aaacttccgttcgcaagccctaatgagccactggtcaaagagcgtgaggtgcgagaagac
cgtgcgtggtggcgttattctctgccagaggcagtaattgcaacaaaacaggcagctggt
cgtctcatcaggagtgctgaggacaagggcgttttagtacttgctgattcaagactggta
tctaagcgatatggcagttcgtttttgaaatcgttacctaacaagaactatcaatgtgtc
tcaacaaagaacatctctggacagattgctaagtggcgagaagaacacgacgcgtag

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