Amphimedon queenslandica (sponge): 100637251
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Entry
100637251 CDS
T02284
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100637251
03016 Transfer RNA biogenesis [BR:
aqu03016
]
100637251
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100637251
Spliceosome [BR:
aqu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100637251
Transfer RNA biogenesis [BR:
aqu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100637251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
100637251
NCBI-ProteinID:
XP_019851209
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MPKIVIISTQAAPTFNDFKMTAFSELGVMPEIIQALEEVDWLLPTDVQAEAIPLILGGGD
VLMAAETGSGKTGAFSLPVIQITYEALRDEKMGGRGQSKIEQSATVGLNPHDRGESLAIS
PDGLLCQCREHKQWHGCRTNLGVNEGKYYYEATVTDEGLCRVGWSTQLASLELGKDKFGF
GFGGTGKKSWSNQFDSYGESFGKGDTIGCYIDLENGSISFSKNGSLFGKAFDIPQGLSGE
TFFPAVVLKNAEMRFNFGDLPFKYSPKNGGIEPFSKAKNLLLSSPVAKPKKKGGTRTPSA
IIIEPARELAQQTHDNIKQFSKYVPAPGIRVLLLVGGESVKDQIKALSDGVDVIIGTPGR
LEDLISTGKLDLASVRFFILDEADGLLTQGHKDLIHKIYSKIPQVSPEGYRLQMIVCSAT
LHNIEVKKLAEKLMHFPTWVDLKGQDSVPDTVHHVVCHVDPLADSSWHKLIKTFQTDGIH
FNDRTGPGMKSQEALSEAVKILKADYLVKAINAHKMDQAIIFCRTKLDCDNIERYLLHLG
GSGKMVNEYSCVCLHGDRRPQERKNNLNSFKTGEVRFLICTDVAARGIDITGIPFVVNVT
LPDDKQNYVHRIGRVGRADRMGLAISLVSTQKEKVWYHSCPSKGKKCNNVQLVENGGCAI
WYDEKQYLSDIEDHLGVSIPTVSSTFEVPTNEYDGKVTYGEKRKEGGVLYDNHTELLAPS
VLELSKLETTAQHTFITSLKGHW
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaattgtaatcatttcaacgcaagccgcgcctacttttaatgatttcaagatg
actgccttctcagaacttggggtcatgccagaaataatacaagcgctagaagaagtggac
tggctcctccccactgatgtacaggcagaagccattccactcatactaggaggtggggat
gtactaatggctgctgagactgggagtggaaagacaggagcattctcactccctgtgata
cagataacatacgaagcattgagagatgagaaaatgggcgggagaggccagagcaagatc
gaacaatcagctacagttggactcaatccccatgacagaggagagtctctagccatatca
cctgatggtttactgtgtcagtgtcgtgagcataagcaatggcatggctgtaggactaac
cttggagtaaatgaaggtaaatattattatgaggctacagtaactgatgaaggattgtgt
cgtgttggatggtcgacccagcttgcctcactggaattaggcaaggacaagtttgggttt
gggtttggaggaactggtaagaagtcctggagcaaccagtttgacagctatggagagtct
tttggtaaaggtgacaccattggctgctatattgatcttgagaacggttccatcagtttt
agcaagaatggcagcctgtttgggaaagcttttgatatacctcaaggactctctggtgag
accttctttccagctgtagttttaaagaatgctgagatgaggttcaattttggtgacctt
ccatttaaatattcaccaaagaatggtgggattgaacctttcagcaaagcaaagaatctt
cttttatcatcaccagtagccaaacctaagaagaaaggagggacacggacaccctcagcc
ataataattgaacctgctagggagctagcacaacagacacatgataacatcaagcaattt
agtaaatacgtccctgcccctggaataagggtattgctgctagtgggaggagagagtgta
aaggatcagataaaggcactcagtgatggggttgatgttattattggcacacctggaaga
ttagaagatctcattagcacagggaaacttgatctagcatctgttcggttctttattctg
gacgaagctgatggtctccttacccagggacataaagacctaattcacaaaatatactct
aaaatacctcaagtctctccagaaggatacagactgcaaatgatagtttgctctgctact
ttgcacaacattgaagtcaagaagttagcagagaaattgatgcacttccctacttgggtg
gatctgaaagggcaagatagtgtccctgatactgttcaccatgttgtctgccatgttgat
ccactggctgatagtagctggcataaactgataaagacttttcagactgatggcatacac
tttaatgatagaactggtcctggaatgaagtcccaagaggcattgtctgaggctgtgaag
atacttaaagccgattacctggtgaaggcaatcaatgcacacaaaatggatcaagctatt
atattctgtcggacgaaactcgattgcgataatattgagagatatcttctgcatttagga
ggatctggtaaaatggtcaatgagtattcttgtgtctgccttcatggtgataggcgtcct
caggagagaaaaaataatttgaattcttttaagactggtgaggttaggtttctcatatgc
actgatgttgctgcaagaggaattgatatcactggaataccttttgttgttaatgttaca
ttaccagatgataaacagaattatgttcacaggatcggtagagttggacgtgccgacaga
atgggactggctatatcacttgtgtccacacaaaaagaaaaggtgtggtatcactcctgc
ccaagtaaagggaagaaatgtaacaatgtgcagttggttgaaaatggcggatgtgccatc
tggtatgatgagaaacagtatttgtctgacattgaagatcaccttggagtctcgataccc
acagtgagttctacgtttgaggttcccaccaatgagtatgatggtaaagtgacttacggg
gagaagaggaaagaaggcggagtgttgtatgataaccacactgagctgctagccccttca
gtactggagctatctaaactagaaacaaccgcacagcacaccttcattacatcactcaag
ggacactggtaa
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