Rhizobium rhizogenes K84: Arad_0140
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Entry
Arad_0140 CDS
T00850
Symbol
rnd1
Name
(GenBank) RNAse D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ara
Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ara03016
]
Arad_0140 (rnd1)
Enzymes [BR:
ara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Arad_0140 (rnd1)
Transfer RNA biogenesis [BR:
ara03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Arad_0140 (rnd1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACM24907
UniProt:
B9JGR1
LinkDB
All DBs
Position
1:133785..134411
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AA seq
208 aa
AA seq
DB search
MAATIRYHEGDISAADAARYTGAIAIDTETLGLIPRRDRLCVVQLSPGDGTADIIRIASG
QSQAPNLVAMLADTTRQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLCRTYTDRHGL
KDNLKELLEVDISKAQQSSDWAAEKLSPAQLEYAASDVLYLHALRDKLTARLVRDGRMEH
AEACFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgctatcacgaaggcgatatttccgccgccgatgccgcccgctat
accggcgccatagccatcgacaccgaaacccttggcctcatcccccgccgcgaccggctc
tgtgttgtgcagctttcgccgggcgacggcaccgctgatatcatccgcatcgcctcgggc
cagagccaagcgcccaatctcgtcgccatgctcgccgatacgacccgccagaaaatcttc
cactacggccgcttcgatatcgccgtactgttccataccttcggcgtcaccaccacgccg
gtcttctgcacaaagatcgcctcgcgcctctgccgcacctataccgaccgtcacggcctg
aaggacaatctcaaggaactgcttgaggtcgatatttccaaggcacagcagtcctccgac
tgggcggcggagaagctgtcgccggcgcagctcgaatatgccgcctcagacgtcctctat
ctgcatgcgctgcgcgacaagctgacggcacgcctcgtgcgcgatggccgcatggaacat
gcggaagcctgcttcgcctttctcccgacccgcgccaagctcgatctcctcggctgggaa
gaggccgatattttcgcgcatagctga
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