Ascochyta rabiei: EKO05_0002350
Help
Entry
EKO05_0002350 CDS
T09445
Name
(RefSeq) DNA-directed RNA polymerase II subunit
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
arab
Ascochyta rabiei
Pathway
arab03020
RNA polymerase
arab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKO05_0002350
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0002350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0002350
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0002350
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0002350
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
EKO05_0002350
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EKO05_0002350
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EKO05_0002350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
62220265
NCBI-ProteinID:
XP_038793022
LinkDB
All DBs
Position
3:complement(join(2308223..2308249,2308306..2308464,2308517..2308597,2308651..2308899))
Genome browser
AA seq
171 aa
AA seq
DB search
MFFLKELEKTIQLHPSYFGPLIRSHIHKELLQKEEGSSTGKYTIVCILDSFDISDGQVMP
GSGSAEYTVHYKAIVWRPYKGEVMDGIVTSILPSGFFVDCGSLQAFVGRNMIPSDIKFEG
NAAPPQWTDGADQVIEKGTNIRIKIKGIRSEVDKMYAVGTMKEDYLGPLSQ
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctcaaagagctcgagaagacgatccagctacatccctcatactttggccct
ctcatccgttcgcacattcacaaggagcttttgcaaaaggaggaaggctcgagcacagga
aagtacacaattgtgtgtatactggactcgttcgacatctcagatggccaggtgatgcct
ggctctggctctgccgagtacaccgttcactacaaggccattgtatggcggccgtacaag
ggcgaggtgatggatggtatagtaacctcgatccttccgtctggcttctttgtggattgc
ggctctctgcaagcctttgttggacgtaacatgattccctcggacatcaaatttgagggt
aacgcagcacctccacagtggaccgatggcgcagaccaggttattgagaaaggcacaaat
atccgcattaagatcaagggtattcgatctgaagtcgacaagatgtacgctgtaggaacg
atgaaagaggattatctgggccctctgtcgcagtag
DBGET
integrated database retrieval system