Arthrobacter sp. LS16: AFL94_05220
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Entry
AFL94_05220 CDS
T04078
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
arl
Arthrobacter sp. LS16
Pathway
arl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFL94_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arl03400
]
AFL94_05220
DNA repair and recombination proteins [BR:
arl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFL94_05220
RecFOR pathway proteins
AFL94_05220
TLS (translesion DNA synthesis) factors
Other SOS response factors
AFL94_05220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
AAA_16
ATPase_2
AAA_24
AAA_25
CobU
AAA
Motif
Other DBs
NCBI-ProteinID:
ALD63431
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Position
1156001..1157053
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AA seq
350 aa
AA seq
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MAANNDREKALESVLGQIDKAFGKGSVMRLGDETRAPIEVIPTGSVALDVALGIGGLPRG
RVVEIYGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQP
DTGEQALEIMDMLVGSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT
GRLSASKTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDIRRIETLKEGTNPVG
NRTRAKIVKNKMAPPFKQAEFDILYGHGISREGSLIDMGVEHNLVKKSGAWFTYDGDQLG
QGKENARRFLRDNPDLATELERQILQKLGVLPAEEVEEDETELRVVEGDQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaataatgatcgggaaaaggcacttgagtctgtcctgggccagatcgacaag
gccttcggcaagggctcggtcatgcgcctgggtgatgaaacccgcgctcccattgaagta
attcctaccggttcggttgcgctggacgtggctctgggcattggcggacttccgcgcggt
cgtgtcgtggagatctacggtcctgaatcctccggtaagaccaccgttgcactgcacgcc
gtggcaagcgcccagcgcaacggcggcattgcagcattcatcgatgctgaacacgctttg
gatcccgaatacgccaagaagcttggcgtggacaccgacgccctgctggtttcccagccg
gacaccggtgagcaggctctggaaatcatggatatgcttgtcggctccggcgcgctggac
atcatcgtcatcgactccgtggccgctctggtgccgcgtgcggaaattgaaggcgaaatg
ggtgacagccacgtgggtctgcaggcccgactgatgtcccaggcgctgcgcaagatcacc
ggccgcctctcggcttcgaagaccaccgcgatcttcatcaaccagcttcgcgagaagatc
ggtgtcttcttcggcagcccggaaaccaccaccggtggcaaggccctgaaattctacgct
tcggttcgcatcgatatccgccgtattgaaaccctcaaggagggaaccaacccggtcggc
aaccgcacccgtgccaagatcgtgaagaacaagatggcgcctccattcaagcaggccgaa
ttcgacatcctgtacggtcacggcatttcccgcgagggctcgctcatcgacatgggtgtt
gagcacaacctggtcaagaagtccggcgcttggttcacctacgacggcgaccagctgggc
cagggcaaggaaaacgcccgccgcttcctgcgcgacaacccggatctggctaccgaactg
gagcgccagatcctgcagaagctcggcgtcttgccagcagaagaagtggaagaagacgag
acagaactgcgagtcgtcgagggcgatcagtag
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