Arthrobacter sp. PAMC 25486: ART_3280
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Entry
ART_3280 CDS
T03487
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arm
Arthrobacter sp. PAMC 25486
Pathway
arm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ART_3280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arm03019
]
ART_3280
03400 DNA repair and recombination proteins [BR:
arm03400
]
ART_3280
Enzymes [BR:
arm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ART_3280
Messenger RNA biogenesis [BR:
arm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ART_3280
DNA repair and recombination proteins [BR:
arm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ART_3280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
Pribosyltran
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
AIY02879
UniProt:
A0A0A1D364
LinkDB
All DBs
Position
3389900..3391972
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AA seq
690 aa
AA seq
DB search
MGREDAVFHDGQFEAIEALVDGGRRALVVQRTGWGKSAVYFVASLLLRARGAGPTLIVSP
LLALMRDQVAAAERAGVRAMAINSANATDWGLVSAALAADEVDVLLVSPERLTNPSFREN
QLPSLVQRTGLLVVDEAHCISDWGHDFRPDYRRIADLIAQLPAAVPVLATTATANSRVVA
DIEEQLGAGVFTIRGPLARKSLRLGVLRLADSRDRLGWLLTHLAELPGSGIIYTLTVSAA
EDTARLLAEAGHVVKAYTGRTDTMDREALEDALKGNQVKALVATSALGMGFDKPDLGFVV
HLGAPSSPVAYYQQVGRAGRGSANADVLLLPGSEDAEIWRYFATASMPAQDKATAVLEAL
GESPKPMSTPALEARVDLRRTPLELLLKVLAVDGAVRRVSGGWESTGAPWVYDEERYRRI
AQARVDEQQSMVEYERMSGCRMEYLAAALDDETAAPCGRCDNCAGRWFGADVVSSAAEAA
GESLRHAGLPLDPRAMWPTGMDRLGVPVKGKLKADEIVSTGRILARMTDLGWGNALRAMF
AAGSPDAPLDPAMAQAVVAVLREWGQSGWEGAGRPVAVVAMPSRSKPLLLASFAQAISEI
GKLPYLGSLSLEFGGPTGERGGNSAYRLAGVWERFAVGPELAAALGASPGGTVLLLDDLV
DSRWSLTVAGRALRQAGAGQVLPLVLAQAG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgggccgggaggatgccgtctttcacgacgggcagtttgaggccattgaggcattggtc
gacggcggtcggcgcgccttggttgtccagcgcacgggttggggaaagtcggctgtgtac
tttgtagcctccctgttgctgcgggctcgcggggccgggcccacgctgattgtctcgccc
ctgctggcgctcatgcgggaccaggtggccgccgccgaacgcgccggtgtacgagccatg
gccatcaactccgccaatgccaccgactggggcctggtctccgcggcgctggctgccgac
gaggtggatgtgctgctggtttcccccgagcggctgaccaatccgtcctttcgggagaac
cagctgccctcgttggtgcagcgcacgggcctgttggtggttgatgaggcgcattgcatt
tccgactgggggcatgacttccgtcccgactaccgccgcatcgccgacctgatcgcccag
ttgccggctgccgtccctgttctggcaaccacggccacggccaactcccgggtggtcgcc
gacattgaggaacagcttggcgccggagtgttcaccatccgcggaccgttggcccgcaag
tccttgcggctcggggtgctgcggctggccgattcccgcgatcggctcggctggctgttg
acccacctggccgagttgccgggcagcggcatcatctacaccctgacagtttccgccgcg
gaggacaccgcgcggctgctggccgaggccgggcacgtggtcaaggcctacaccggacgc
accgacaccatggaccgtgaggccctggaggacgcactgaaaggcaatcaggtgaaggcg
ctggtggccaccagtgccctgggcatggggttcgacaagcctgacctgggcttcgtggtc
cacctgggtgcgccgtcgtcccctgttgcctactaccagcaggtgggccgtgccggacgt
ggcagcgccaacgccgatgtgctgctgctgccgggcagtgaggatgccgagatttggcgt
tactttgccacggcgtccatgccggcgcaggacaaggccacggctgtgcttgaggcgctg
ggtgaatcgcccaagcccatgtcaacgccggcgctcgaggcccgggttgatctgcggcgt
accccgcttgagctgctgctgaaggtgctggccgtggacggggccgtgcggcgggtgtcc
ggcggctgggaatcgaccggggcgccgtgggtttacgacgaggaacgctatcggcgcatt
gcccaggcccgtgttgacgagcagcagtccatggtggaatacgagcgcatgtcgggctgc
cgcatggagtacctggcggccgccctcgacgacgaaactgcagcaccgtgcggacggtgc
gacaactgtgcggggcgctggtttggcgccgatgtggtgtccagcgccgcagaagctgcg
ggggagtcgctgcgccatgcaggactgccgcttgatccgcgcgccatgtggcccacgggc
atggaccgtctgggagtccccgtgaagggcaagctcaaggcggatgagattgtgtccacc
ggccgcatcctggcgaggatgacggatctgggctggggcaatgcgctgcgtgccatgttt
gccgcaggctccccggatgcgccactcgatccggccatggcccaggcagtggtggcagtt
ctgcgtgagtggggccagtccggctgggaaggtgccggtcgcccggtcgcggttgtcgcc
atgccctcgcgctccaagccgttgttgttggcgtcctttgcccaggccatctccgagatt
ggcaagctgccgtacctgggatcgctgtcgctggaatttggcgggccaaccggtgaacgc
ggcggcaacagcgcctaccgccttgccggtgtgtgggagcgcttcgccgtggggcccgaa
ctggccgcggcacttggcgcatctcccggaggcaccgtcctgctgctggatgacctggtt
gacagccggtggtcgttgacggtggccggccgtgccttgcgccaggcaggggcaggccaa
gtgctcccgctagtattggcccaggccggctaa
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