Rhizobium rhizogenes K599: B0909_00725
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Entry
B0909_00725 CDS
T04767
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aro
Rhizobium rhizogenes K599
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aro03021
]
B0909_00725 (rpoH)
Transcription machinery [BR:
aro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0909_00725 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AQS60955
UniProt:
A0AA86HR79
LinkDB
All DBs
Position
1:2178729..2179631
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AA seq
300 aa
AA seq
DB search
MARNSLPTITAGEAGLNRYLDDIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVVSMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHDSQEDVLIEQDELETRRRMLAKAMGVLNDRER
RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacgattaccgccggcgaagccggtctcaatagatatctc
gacgacatccgcaaatttccgatgctggagccgcaggaagaatacatgcttggcaaacgt
tacgccgagcatggcgaccgcgacgccgcccataagctcgtcaccagccatctgcgtctc
gtcgccaagatcgccatgggttaccgtggttatggcctgccgatcggcgaagtcgtgtcg
gaaggcaatgtcggcctgatgcaggcggtcaagaaattcgatccggaacgcggtttccgc
ctcgccacctatgccatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcacgaccgccaaccagaagcgcctgttctttaacctgcgc
cggctgaaaggccgtatccaggcgatcgatgacggcgatctgaagccggagcacgtcaag
gaaatcgcgacgaagctgcaggtctcggaagaagaagtcgtctcgatgaaccgccgcctg
catggcgacgcctcgctgaatgcgccgatcaaggcgtcggaaggcgaatccggccaatgg
caggactggctggtggatgaccatgacagccaggaagacgtgctgatcgaacaggacgag
ctggaaacccgccgccgcatgctggccaaggccatgggcgtgctgaacgatcgcgaacgc
cgcatcttcgaggcccgccggcttgccgaagatccggtgacgctggaagaactctcctcc
gagttcgacatcagccgcgaacgcgtgcgccagatcgaggtgcgcgccttcgagaaggtg
caggaagccgtgcagaaggaagcgcttgaagctgcgcgcgccttgcgcgtggtggatgcg
taa
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