Rhizobium rhizogenes K599: B0909_05965
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Entry
B0909_05965 CDS
T04767
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0909_05965 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_05965 (uvrA)
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0909_05965 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B0909_05965 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_16
RsgA_GTPase
AAA_33
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AQS61847
UniProt:
A0AA86HK27
LinkDB
All DBs
Position
1:1158517..1161438
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPMVRGRKGEYKKELADLMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAVAEFA
DRPLPPEETAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPS
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSNKWSD
LSKEAQQAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINRLHIGEVTEMSIRTARDWFEVLPESLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGSPQ
EVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV
EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL
LDRRPAGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaagacgatttccatccgtggtgcccgcgagcataatctcaagggtatc
gatctcgatctgccacgcaacaagctgatcgtcatgaccgggctttccggctcgggcaag
tcgtcgctcgccttcgacacgatctatgccgagggccagcgtcgttatgtcgaaagcctc
tcggcctatgcgcgccagttcctcgaaatgatgcagaagccggatgtcgaccagatcgac
ggcctgtcgccggcaatctccatcgagcagaagaccacctcgcgcaatccgcgctccacg
gtcggcacggtcaccgaaatctacgactatatgcgcctgctgttcgcacgtgtcggcgtt
ccctattcgccggccaccggcctgccgatcgaaagccagaccgtcagccagatggtcgac
cgcatcctcgccttcgaggaaggtacgcgtctttatattctcgcgccgatggtgcgcggg
cgcaaaggcgaatataaaaaggaactcgccgacctgatgaagaagggcttccagcgcgtc
aaggtggatggacagttctacgaaatcgccgacgtgcccgccctcgacaagaaatacaaa
cacgatatcgacgtagtggtggaccgtgcggtggttcgcccggacatggctgcacgcctt
gccgacagtctcgagacctgcctcaagctcgccgacgggctggctgtcgcggaatttgcc
gacaggcccctgccgccggaagagacagccgccggcggttccgccaacaagtctctcaac
gaaacccatgagcgtgtgctgttttcggagaaattcgcctgccccgtttccggcttcacc
atcccggaaatcgaaccgcggctgttctccttcaacaatcccttcggcgcctgccccagc
tgcgatggccttggctcgcagcagaaggtcgatgaaaacctgatcgtgccggagccggcc
cgcaccctgcgtgacggcgccatcgctccctgggccaaatcctcatcaccctattacaac
cagacgctggaagcgctcggcaaggccttcggtttcaagctgtcgaacaaatggtcagat
ctctcgaaagaggcgcagcaggccatccttcagggcaccgatgacaagatcgaattcaac
tatcaggacggcgcccgctcctacaagacggtaaagaatttcgaaggcatcgtgcccaat
ctggagcgtcgctggaaagagactgacagcgcctgggcgcgcgaggaaatcgaacgctac
atgtcggcggccccctgcccggcctgcgccggttatcgcctgaagccggaagcgctcgcc
gtcaagatcaacaggctgcatatcggtgaagtcaccgaaatgtcgatccgcaccgcccgc
gactggttcgaggtgctaccggagagcctcaacgccaagcagaacgagatcgccgtccgc
atcctcaaggaaatccgcgaacgcctgcggttcctgaacgatgtcgggctggattatctc
agcctgtcgcgcaattccggcacgctttccggcggtgaaagccagcgcatccggctggcg
tcgcagatcggttccggcctcacaggcgttctctacgttctcgacgagccgtcgatcggc
ctgcaccagcgagataacgcccgcctgctcgatacgctgaaacatctgcgcgatatcggc
aacactgtcatcgtggtcgaacatgacgaggatgccatcctgacggcggattatgtggtc
gatatcggcccggccgccggcattcatggcggtcaggtcattgccgaaggttcgccgcag
gaggtgatggccaatccgaaatcgctgaccggcaaatacctctccggtgagctcggtgtc
gccgtgccggcagaacgccgcaagcccaagaagggccgcgaaatcaaggtatttggcgcg
cgtggcaacaatctgaagaatgtcacggccgccgtgccgcttggcgtcttcacggccgtg
accggcgtatcgggtggtggcaaatccaccttcctgatcgagacactctacaaatcggcg
gcgcgccgggtgatgggcgcacgcgaaatcccggccgaacacgaccgcatcgatggtttc
gaattcatcgacaaggtgatcgacatcgaccagtcgccgattggccgcacgccgcgttcc
aacccggccacctataccggcgcctttacgccgatccgcgactggttcgccggtctgccg
gaagccaaggcgcgcggttatgcgcccggccgtttctccttcaacgtcaagggcggccgc
tgcgaggcctgccagggtgacggcgtcatcaagatcgagatgcactttctgcctgacgtc
tatgtcacctgtgacgtctgccacggcaagcgctacaatcgcgagacgctggacgtgact
ttcaagggcaagtccatcgccgacgtgctggatatgacggtggaggaaggcgttgagttc
ttcgccgccgtgccggcggtgcgcgacaagctgcaatcgctgttcgatgtcggcctcggt
tacatcaaggtcggccagcaggccaacaccctttccggcggtgaggcacagcgcgtcaag
cttgccaaggaactgtcgaaacgctcgacgggccgcacgctctatattctcgacgagccg
acgacaggcctgcatttccacgatgtcaacaagctcctggaaatgctgcatgcgctggtg
gaacagggcaattccgtggtggtgatcgaacacaatctcgaagtcatcaagacggccgat
tggatcatcgatatcggccctgaaggcggcacgggcggcggcgaagtggtggccaccggt
acaccggaagacatcgtcaaggtcgagcgctcctatacgggtcacttcctgaaggaactt
ctggaccgccggccggccggcaagcgggaagctgcggagtaa
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