Rhizobium rhizogenes K599: B0909_25415
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Entry
B0909_25415 CDS
T04767
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aro
Rhizobium rhizogenes K599
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aro03016
]
B0909_25415 (thpR)
Enzymes [BR:
aro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B0909_25415 (thpR)
Transfer RNA biogenesis [BR:
aro03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B0909_25415 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AXO68311
UniProt:
A0AA86M351
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All DBs
Position
1:complement(2484806..2485399)
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDIDGRTADEVVDRLDR
IERPEFQLNLTGMGSFGSKKPHSIWAGVSPSPEMHALQAEIERICQRIGLPPDPRKFMPH
VTLARLRSSRVDDVVQYLSGRGNFRTSPFTVGRFVLMSSKESVGGGPYIVEEAFPLHEAR
SSSIFSSSDLHPAKSML
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggctatgagcctctcattg
ttgcgcggtggtctgccgggagcccggtggatcgatgtggagaattatcacataaccctg
cgttttatcggtgacatcgacgggcggaccgccgatgaggtcgtggacaggctggatcgg
atcgaaaggccggagttccagctcaacctcaccggcatgggttccttcggttccaagaaa
ccgcattccatctgggccggggtttctccctcaccggaaatgcatgcgcttcaggcggaa
atcgaaagaatctgccagaggatcggtctgccgcccgatccgcgcaagttcatgccgcat
gtcacgcttgcacggctgcgctcctcccgcgtggacgatgtggtgcagtatctttccgga
cgcggcaacttccgcacctcgcccttcacggtcggccgtttcgtgctgatgtcgtccaag
gaatcggtgggcggcgggccttatatcgttgaagaggcattcccgcttcacgaggcgcgg
tccagttccatcttttcgagcagcgatctgcatcccgccaagagcatgttgtag
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