Agrobacterium rubi: G6M88_04635
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Entry
G6M88_04635 CDS
T08058
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arui03021
]
G6M88_04635 (rpoH)
Transcription machinery [BR:
arui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G6M88_04635 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QTF99730
LinkDB
All DBs
Position
1:complement(957925..958827)
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AA seq
300 aa
AA seq
DB search
MARNSLPSITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGKIQAIDEGDLKPEHVTEIATKLQVSEEEVISMNRRL
HGDASLNAPIRAAEGEAGQWQDWLVDDHESQETVLIQQDELETRRRMLSKAMGVLNERER
RIFEARRLSEDPVTLEDLSTEFDISRERVRQIEVRAFEKVQEAVQKEALEAAKALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgccttcgattactgccggtgaagccggtctgaaccgatatctt
gatgaaatccgcaagtttccgatgctggagcctcaagaggaatacatgctcggtaaacgt
tatgccgagcatggcgaccgtgatgccgcgcatcggctggtgacgagccacctgcgtctc
gtcgccaagatcgctatgggttaccgcggctacggcctgccgatcggcgaagtcgtatcc
gagggcaatgtcggcttgatgcaggccgtcaagaagttcgatccggagcgcggctttcgc
cttgcgacctacgcaatgtggtggatcaaggcgtccattcaggaatatatcctgcgctcc
tggtcgctagtgaagatgggaacgaccgccaatcagaagcgtctgttcttcaatctgcgt
cgtttgaagggaaagattcaagccatcgacgagggtgatctgaagcccgagcatgtaacc
gagatcgcgaccaagcttcaggtatccgaggaagaagtcatctccatgaaccgccgtctg
cacggcgatgcgtcgttgaacgcgcccattcgggcggcggaaggcgaagcagggcagtgg
caggactggctggtggatgatcacgagagccaggaaaccgtgctcatccagcaggatgag
ttggaaacgcgccgccgcatgctcagcaaggccatgggagtgctgaacgagcgtgagcgc
cgtatcttcgaggcccgtcgtctgtccgaagacccggtgacgctggaagatttgtccacc
gagttcgatatcagccgcgaacgcgttcgccagatcgaggtgcgtgccttcgagaaggtt
caagaggctgttcagaaagaagcgctcgaagctgccaaggctttgcgcgtggtcgatgca
taa
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