Agrobacterium rubi: G6M88_04645
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Entry
G6M88_04645 CDS
T08058
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arui03009
]
G6M88_04645
Enzymes [BR:
arui01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
G6M88_04645
Ribosome biogenesis [BR:
arui03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G6M88_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QTF99732
LinkDB
All DBs
Position
1:complement(960082..961104)
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AA seq
340 aa
AA seq
DB search
MNDPFKQGGDARKVLIAGEDAEGRLDAWLAAEVGGDLSRSRIKALIEQGAVFLNEKPIIE
PKKKVHPGDRIEITMPEPEDPQPKGEDIPLEVEYEDEDLIVLLKPPGLVVHPGAGNWTGT
LVNALIHHCGDSLSGIGGVKRPGIVHRLDKETSGVMVVAKNDNAHRKLAAQFADHGRTGP
LERAYKAIVWGRPKTLRGTIDAALGRGADRTKRAVKREDTDDAREAITHYEVVERYHEKP
DATCLASLVECRLETGRTHQIRVHMSHIGHPLIGDPEYGAAFRTKANLLPDEAKEVVNRF
PRQALHAYLLAFEHPRTGEVMEFETDMPDDMEELAQALRG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccctttaaacaaggcggagacgcaaggaaagtcctgattgccggggaagat
gccgaaggacgcctcgatgcatggctggcagccgaagtgggcggcgatctgtcgcgcagc
cgcatcaaggcgctgatcgagcagggcgcggtttttctgaatgagaagcctatcatcgag
ccgaagaagaaggtgcacccgggcgaccgcatcgagatcaccatgcctgagccggaagat
ccgcagcccaagggtgaggatattccactcgaggtggagtatgaagacgaagacctcatc
gtgcttttgaagccgcctggccttgtcgtgcatcccggcgctggcaactggaccggcacg
ctggtcaatgcgctgatccaccattgcggcgatagtctctccggcattggcggcgtcaag
cgtcccggcatcgtgcaccgtctggacaaggaaaccagcggcgtgatggtggttgccaag
aatgacaatgcccatcgcaagctggccgcgcaatttgccgaccacggacggaccgggccg
ctggagcgtgcctataaggcgatcgtctggggccgccccaagactttgcgcggtaccatt
gatgcggctctggggcgcggagccgaccgcaccaagcgggccgtgaagcgcgaggacacg
gacgatgcgcgcgaggccatcacccactacgaggtggtcgagcgctatcatgaaaagccg
gatgcgacctgcctcgcctcgctcgttgagtgccgtctcgaaaccggccgcacccatcaa
atccgcgttcatatgtcccatatcggccatccgctgatcggtgaccctgaatatggcgcg
gcctttcgcaccaaggccaacctgttgccggacgaggcaaaagaggtggtcaaccggttc
ccgcggcaggctttgcatgcctatcttcttgctttcgaacacccccgcacgggcgaggtc
atggagttcgaaacggatatgccagacgacatggaagagttggcgcaggcacttagaggc
taa
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