Acipenser ruthenus (sterlet): 117422999
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Entry
117422999 CDS
T07327
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arut03016
]
117422999 (tsen54)
Transfer RNA biogenesis [BR:
arut03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117422999 (tsen54)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
117422999
NCBI-ProteinID:
XP_033894193
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Position
18:10593911..10604661
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AA seq
532 aa
AA seq
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MADCAGKGSAAACENEDWSSEVLSPSELFAARTRDHKLPARGQKDFLPDGSQRQSEKLRR
GLEEHWKLVSEERVERQGSLVKAEWKPKDNVVVLMSPAGKFWQTMGYSEQGKQFLQSEEA
LYLMECGNVEVFYRELPLSVQEGYELMLSNRTISLQQYQVFSHLKRLGYIVNRFDASAVP
SLYERQLNLVQKRDKADRHHRKRKRSRSPSRSKDTPEGQSQTRENTEQKAHEDTMSSREE
SQNSGSSTCMIPSERAAACSMEVKQGGTSEERSCWWDSPLVPQSEQTQDRQLHSPQRSGL
KWDFSRISFPNLGLDCPLTSLQAPDPGLLPSAVPARACDVSAWLQRLNLREERLSRRERE
QQDRERQYKRGVNEDREVRSCRNWQDYKELLQRRSRQSCRKWPAHLWNEAVKPLTAPGQA
TSTGDLLQQIGMMQPSRLLDEAAGLVEDSGGMRISFDVYQADTVAEFKKSNPGKPYSRMC
VCSFDGPVPDLRTLKRLAFQSGDVPVTYAVVDNGDISFYSFKGFQLPTDCCY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctgggaagggctctgcagctgcttgtgagaatgaagactggtctagt
gaagtgctcagtccctcagagctgtttgcggctcgcacccgggaccacaagctccctgcg
cggggccagaaggactttctccctgacgggtcccagcggcagagtgagaagttgcggcga
ggcctggaggagcactggaaactggtctctgaggagcgtgtcgagaggcaggggagtctg
gtgaaagcggagtggaaacccaaggacaatgttgtggtgctcatgtctccagcggggaag
ttttggcagaccatgggctactctgaacaggggaagcagtttctccagtccgaggaggcc
ctgtacctgatggagtgtggaaacgtggaggtgttttacagagagctgcctctgtctgtt
caggagggttatgagctgatgctgtcaaacaggacgatctccctgcagcaataccaggtg
ttcagtcatctgaagagattgggttatatagttaacagatttgatgccagtgccgttccc
tccctgtatgagagacagctaaacctggtgcagaaacgagacaaagccgaccggcaccat
cgaaagagaaagaggagccgcagtcccagcaggtccaaggatactccagaaggacaaagc
cagacacgagagaatactgaacagaaagcacatgaagataccatgagcagcagagaggaa
agccagaactctgggtctagtacttgcatgatcccatctgaacgggctgctgcctgcagc
atggaggtgaaacagggaggtacctctgaggagaggtcttgttggtgggactcccccctg
gttccacaatcagagcagacacaagacaggcagctacactccccacagcgctccgggctc
aagtgggacttttcaagaatctccttccccaatctgggcttggactgccctctcaccagt
ctacaagccccagaccctggcctgctgcccagcgctgtccctgccagggcctgcgatgtc
tcggcctggctgcagaggctgaacctccgagaggagcgtctgtcaaggagggaaagggag
cagcaggacagggagaggcagtacaagagaggagttaacgaggacagggaggtgaggagc
tgccgtaactggcaggactacaaggagctgctgcagagaaggagccgacagagctgtagg
aagtggccggctcacctgtggaatgaagctgtcaagccactcactgctcctggacaggcc
acctccacaggtgacctgctgcagcagattggtatgatgcagccttctcgactgcttgac
gaagctgccgggcttgtggaggattcgggaggaatgaggatttccttcgatgtgtaccag
gcggacactgtagctgagtttaagaaaagcaatccagggaaaccctactcaaggatgtgt
gtctgcagtttcgacgggccagtgccggacttgcggaccctaaagagactggcttttcag
agcggggacgtgccagtgacctacgccgtggtggacaatggagacatctccttctactcc
ttcaagggcttccagctacccactgactgctgctactga
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