Acipenser ruthenus (sterlet): 117423519
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Entry
117423519 CDS
T07327
Name
(RefSeq) ATP-dependent DNA helicase Q5-like isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117423519
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117423519
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
117423519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ5
Helicase_C
RecQ_Zn_bind
ResIII
TFIIS_M
Motif
Other DBs
NCBI-GeneID:
117423519
NCBI-ProteinID:
XP_033895337
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All DBs
Position
18:9930349..9959735
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AA seq
1046 aa
AA seq
DB search
MSSNKKRPKDSSNPGPECKIKQALKNVFGFESFRTSLQENATRAVVQGEKDVFVCMPTGA
GKSLCYQLPAVLAKGVTIVVSPLIALIQDQVDHLLAMKVKACSLNSTLQAQERSRIEADL
KSESPCIKLLYITPEMAASHSFQPLLSLLLSRGLLSYLIVDEAHCVSQWGHDFRPDYLKL
GFLRDRIPGTPCVALTATATKKVQEDIAHSLHLRQPLANFKTPCFRTNLFYDVIFRNLLP
DPYSNLKEFCLQALGEKNTDGGFSGCGIIYCRTRDSCGELANKLTQRGILSKAYHAGLKA
GDRTMVQNEWMEGKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGA
PSCCRLYYSRTDQDQLRFLITKEISKSQAKRGAVNDSDKATMAGFEALVAFCEKDGCRHA
AIAQYFGDEKPRCNKSCDFCKNPAAVRNQLESSRCLGSGGRTRIGPAATSTGPFGYDREL
YAGGRRGYGFERYDGSEGDSEEDPEHRKQEWKSFFQKQMSIRKDKETPKEDFVPPDLWSP
LREAANQKIPRLSVKAREHCLRMLEEALSSQQRAVFTGSSPDPHSRAVEMEYEAFKGCKS
SNLYKAAVLRKVSEIKKDVPPASTGPSSAESPSESDEAKPGASTEGFVSAAQIYSLKSKR
VGAGFRGSSNTFQSAAELLHASRSTEEAGSSSIETVEEHPFTGGSNGAGGDENLTTDKER
SQQLPSASKKNSLWDSPTKNIKLSKKLLRLAGSAMKDSQNISKFFTNKEESVGHSFNLPL
ALAPGHLETHRSSTEELRNSELQDRFSCLETIPCEDGALETNQNQEFPSLEEETQLLTNN
IEDVCCQKTTAKKRTSLLPEEEPEDVRNSVSSTWKRPPIEEGPQDSRAPPPKRQRPGTVP
TILCQPEGKGTLVKKKVSFHPTLAEAKLEEGAPRVAQPQAEKAAVSLKEAADIVVKYLTP
FYKNGRFASKELFKAFAKFLSHRLTEGKTPHKKNVKEGAQRLIRSFFKDRPKCESKEDWR
HLQSDEGPQTPGTTPTLLTHTREDTG
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaaaaaaagaccaaaagactcctccaaccccggcccagagtgcaagatc
aaacaggctctcaaaaacgtcttcgggttcgaatcctttcggacttccctgcaagaaaac
gctactagagcggtggtacaaggtgaaaaggatgtgtttgtgtgcatgcccactggtgct
gggaaatcactctgttaccagctgcctgctgtcctggctaagggagttaccatcgttgtg
tccccactcattgcacttattcaggaccaggtggatcaccttcttgctatgaaggtgaag
gcctgctctctgaactccacactccaagcacaagagcggagcaggattgaggcagaccta
aagagtgagagcccctgtatcaagctgctctacatcaccccagagatggcagcgtcccat
tcctttcagcccttgctgtccttgctgctgtcccgtgggctgctgtcctacctcattgtg
gatgaggcgcactgcgtctcccagtggggacacgacttccggcctgactacctgaagctg
ggctttctgcgggaccgtattccaggaaccccctgtgtggcactgaccgccacggccaca
aagaaggtccaggaggatattgcacactccttgcacctgcgccagccccttgccaacttc
aagacaccttgcttcaggacaaacctcttctacgatgtgatcttccggaatctactgcct
gacccctactcaaacctcaaggagttctgtctgcaagcgctaggagaaaagaacacagat
gggggattctctggctgtgggataatttactgtcggaccagagacagctgtggagagttg
gcaaataagctgacccagagagggatcttatccaaggcttaccatgcaggcctgaaggca
ggtgaccggacgatggtgcagaacgagtggatggagggcaaagtgccggtcattgtggcc
accatcagcttcggaatgggagtggacaaggccaatgtcaggtttgtggctcattggaac
atagccaagtccatggcagggtattaccaggagtctgggcgagcaggcagagatggagcg
ccctcttgctgcaggctgtattattccaggacagaccaggaccaactcaggtttcttatc
acaaaggagatttccaagagccaggcaaaacgcggtgctgtgaatgattctgataaggcg
accatggcaggctttgaggccctggtggccttctgtgagaaggatgggtgtcgacacgct
gcaatcgctcagtattttggggatgagaagccgcgctgcaacaagtcttgtgatttctgc
aagaaccccgcagcagtcaggaaccagctggagtcatctcgctgtctggggtcaggtggg
aggacccgcatcggaccggctgccacctcgaccgggcccttcggctatgaccgggagctg
tatgctgggggccgtcgcggctacggctttgaaaggtatgacgggtctgagggggattct
gaagaggacccggaacatcggaagcaggaatggaagagttttttccagaagcagatgagt
atacgcaaggataaggagacaccaaaggaagactttgtgccccctgacctgtggtccccc
ctgagagaggctgcaaaccagaagatcccccggctgtccgtgaaggctcgggagcattgt
ctacgcatgctggaggaagccctgagcagccagcagagggcagttttcacagggagcagc
cctgacccccattcccgtgctgttgagatggagtacgaggccttcaaagggtgcaagtca
tccaacctgtacaaggcagctgtgctcaggaaggtgtcagagataaagaaggatgtgccc
ccagccagcactgggcccagcagtgcagagagtccctctgagagtgacgaggcaaagcct
ggagcctccactgagggctttgtgtctgccgctcagatctactcgttgaagtcaaagcgg
gtgggcgctgggttcagaggctcgtctaacacgttccagtcagctgcagagcttctgcat
gcctctaggagcaccgaggaggctggcagctccagtattgagactgtggaggaacaccct
ttcacaggagggtcgaatggggcagggggagatgaaaacctcaccacagacaaggagagg
agccagcagctgcccagtgcctctaagaagaactccctgtgggacagccccaccaaaaat
atcaaactctcaaagaaactgctgcggctggccgggtcggccatgaaggactcccagaac
atctccaagttcttcaccaacaaagaggagagcgttgggcactcgtttaatctgcctctg
gctctagctcctgggcatctagagacccacaggagctctacagaggaattaagaaattca
gaactgcaggataggttctcatgtttagaaacaatcccatgtgaggatggtgccttggaa
acaaaccagaatcaagaattcccctctttagaagaagaaacgcaattgttaactaataac
attgaggacgtctgttgtcagaaaaccacagcaaaaaaaaggacaagccttctgcctgag
gaggagccggaagatgttagaaactctgtctccagtacttggaagagacctcccatagag
gagggaccccaggactctcgagccccgccccccaagcgacagcgtcctggcactgtgccc
accatactgtgccaacccgagggcaagggtaccctggtgaagaagaaggtcagttttcac
cccaccctggcggaggcaaagctggaagaaggggcaccccgagtggcacagcctcaagcg
gagaaggcagcagtgtctctgaaggaggcagctgacattgttgtgaagtacctgacacca
ttctacaagaatggcaggtttgcttccaaggagctgtttaaagcttttgcaaaattcttg
tctcaccggctgactgaaggaaagacaccccataaaaaaaatgtgaaggaaggagcccaa
cggctaatcagaagcttcttcaaggatcgcccgaagtgtgagagcaaggaggactggaga
cacctgcagagcgatgaggggccgcagaccccgggcaccacaccaacactgctcactcat
accagggaggacacaggctaa
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