Arthrobacter sp. ATCC 21022: AUT26_12580
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Entry
AUT26_12580 CDS
T04477
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
arz
Arthrobacter sp. ATCC 21022
Brite
KEGG Orthology (KO) [BR:
arz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arz03400
]
AUT26_12580
DNA repair and recombination proteins [BR:
arz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AUT26_12580
Archaeal homologous recombinant proteins
AUT26_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_15
AAA_21
Collagen
Motif
Other DBs
NCBI-ProteinID:
AMB40948
LinkDB
All DBs
Position
complement(2787944..2791033)
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AA seq
1029 aa
AA seq
DB search
MRIHRLEIEAFGPFAQPQHIDFDQLGAQGLFLLNGATGAGKTSVLDAICFALYGSVPGAR
QDGKRLRSDHAAPTAEPRVVCEFSARGRRFEVTRSPAWDRPSARGRKGFTTQQAKTLLRE
RVAGEWVEKSSRNDEAGAELSEVLGMDREQFTRVVMLPQGDFAAFLRSKASDRLDLLQKL
FGTHRFESVERQIQLQAAEAARAVEDNAAELKMLLDRVSAEAAHLGLESTGPAATGSTGT
PGSTGTPGSTGTPGSSVAVPSEETGLAPEDWLGAIGDAIATECRRRREQADAAEARSARL
AAALQEDRDKAQRHARLAAATQRRVLLELAAPRALEDRDRLGRHRRASVLGGHLDAVENT
ARKHRAAVAAMESLREKLASAGFSEATLAEDLEKVKKNVAVLEARLPDERRLEDLGVRIQ
EKLREQAAAGLAVESLARSLETLRAEDAALLADMEPLEPLAGRREVAEREAAAAAEVVDL
VARYQAAARDRDGLEALHADARTKTQDLRQAWLDLREERLANAAGELAAALADGDPCPVC
GSQDHPHPAEAARSALSLAQDEETAALHFETSEKELTGIAAKLTSAGQLLAGLAAQGGAV
DPALAEEAAANAAMELAKARDAAARLDSLRSRHAGLTARMEKLQEDHNAAEATAGEAATL
SGVLGEQHAELEADLSGLRAGFTSLKARLEELTGQHGLLQTAAAAAREVDGTERAAKEAL
AVLERALPEAGFSTADEARRDVLSASDVVGLEKSLSDYDTEAARLDELFAAEDLVLAAKE
ATIGELPKDQDQLKNSTAEALAAAKSAKDLALAVGLADKAAQTVTSLRGRYLNLAADGRE
PRERSRLLSGLADTLRGAGDNTYRMSLNSYVLAARLEQVAAAASERLVAMSDGRYTLRHT
DAKAARGARSGLGLEVVDQWTGQRRDTSTLSGGESFMASLSLALGLADVVQHEAGGVDIE
TLFVDEGFGSLDEQALEQVMDALEGLRDGGRVVGLVSHVAEMKQRISSQLQVVKGRSGST
VRVVEAMPV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatccaccgcttggaaattgaggccttcggtccgttcgcccagccgcagcacatt
gatttcgaccaactcggcgcccaggggcttttcctgctcaacggtgccacgggggcaggc
aaaaccagcgtgttggacgccatctgttttgccctctacgggtctgttcccggtgcccgg
caggacggcaaacggctgcgcagcgaccacgcagcgcccacagccgagccccgggtggtc
tgtgagttctccgcccgcggccgcaggttcgaagtcacccggtctcccgcgtgggaccgg
ccgagcgcgcgtggacgcaagggcttcaccacccagcaggccaagacgctcctccgggaa
cgggtggccggtgagtgggtggagaagtcgtcgcggaacgacgaagccggcgccgagctt
tcagaggtcctgggaatggaccgcgagcagttcacccgggttgtcatgctgccgcagggc
gactttgccgccttcctgcgttccaaagcgtcagaccgcttggacctccttcagaagctc
tttggtacccaccgctttgagtcggtcgagcggcagatccagcttcaagcggcggaagct
gcccgggcagtcgaggacaatgccgctgagctgaagatgttgctggaccgcgtgtccgcc
gaggccgcgcacctggggctggaaagcaccgggcctgcagccacgggatccaccggcacg
ccgggatccaccggcacgccaggatccaccggaaccccgggctcaagcgttgcggtgcct
tcggaagagaccggactggcgcccgaggactggctcggggcaataggtgatgctattgcc
acggagtgtcgtcgacgcagggaacaagctgacgcagccgaggcccgctcggccaggttg
gcagccgcgttgcaggaagaccgggacaaagcgcagcggcacgcgcggttggctgctgcc
acgcagcgcagggtactcctcgaactggcagccccgcgcgcactggaggaccgggacagg
ctcggccggcatcgtcgcgcatcagtccttggcggacacctcgacgccgttgagaatacc
gcgcggaaacaccgggccgccgtcgcggccatggagtccctccgcgaaaaactcgcctct
gcaggattttccgaagccacgcttgccgaggacctggaaaaggtgaagaagaacgtggcc
gtgctggaagcgcggcttccggacgagcgccgcttggaagatcttggagtccggattcag
gagaaactccgggaacaggctgccgcagggctggccgtggaatccttggcacgctcattg
gaaaccctccgcgccgaagatgccgccctcctggcggacatggagccgttggagcccctc
gcgggccggagggaggttgctgagcgtgaagcggcagccgcggcggaggtagtggacctc
gtcgcccggtaccaggccgcagcccgagaccgggatggcttggaagcccttcacgcggac
gcgcgaacaaagacccaggatctccgccaagcatggctggaccttcgggaagaacggctc
gccaatgccgcgggagaactcgccgcagcgctggctgacggtgatccatgtcctgtctgc
ggcagccaggaccacccgcatcccgctgaagccgcgcggagcgcactctcccttgcccag
gatgaagagactgcggccctgcactttgaaacgagcgaaaaagaactcacaggcattgcg
gcgaagctgacatctgccgggcaattgctggccggtttggctgcccaaggcggagcggtg
gaccctgcgctcgcggaggaagcagcggcgaacgcagcgatggagcttgcaaaagcacgg
gatgcggccgcccgccttgattccctgcgttcccggcacgccgggctcacggcgaggatg
gagaagctgcaggaagaccacaatgccgctgaggcaacggccggcgaggccgccactctg
tcgggtgttcttggggaacagcacgccgaactcgaagcggacttgtccggacttcgggcc
ggtttcaccagcctgaaagcgcgcctcgaagagttgaccggacagcatgggctgctgcag
acggcagcagccgccgcacgtgaggtggacgggacagagcgggccgcgaaggaggccttg
gctgttttggagagggccttgccggaagcagggttcagcaccgcggatgaagcccgccgg
gacgtgctgtcagcgtcggatgtggtgggactggagaagagtctttcggattacgacacc
gaggctgcccggctggatgagttgtttgccgccgaagaccttgtcctcgctgccaaggaa
gccactatcggagaactgccgaaggaccaggaccaactcaagaactcgacggctgaagcg
ctggccgctgcaaagtccgccaaggatcttgcccttgcggtcggtctggcggataaagct
gcgcaaacggtgaccagtctgcgcggacgttacctcaatctcgccgcggacggcagggaa
ccgcgggagcgttccaggttactcagtggattggccgataccctccgcggcgccggtgac
aatacctaccggatgagcctcaacagttatgtcctggccgcacgcctggagcaggttgcc
gctgcagcttcggaacggcttgttgccatgagcgatggccgctacaccctccggcacact
gacgcgaaagccgcccgcggggccagatccggcctggggcttgaagtcgttgaccagtgg
acgggccagcgacgcgacacctccacgttgtctggtggcgaatcgttcatggcctcgttg
tcattggctctcggtctggcagatgtggtccaacacgaggccggcggtgtggacatcgaa
acgttgttcgtggacgaaggctttggaagcttggacgagcaggccctggaacaagtgatg
gatgctctggagggcctgcgtgacggcggcagggtagtggggttggtcagtcacgttgcc
gagatgaagcagcgcatcagcagccaattgcaggtggtgaagggccgaagtggctccacc
gtgcgagtggtcgaagcgatgcctgtctga
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