Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0549
Help
Entry
RATSFB_0549 CDS
T01624
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RATSFB_0549 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asb03400
]
RATSFB_0549 (xseA)
Enzymes [BR:
asb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RATSFB_0549 (xseA)
DNA repair and recombination proteins [BR:
asb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RATSFB_0549 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
BAK81111
UniProt:
G2IH33
LinkDB
All DBs
Position
638956..640161
Genome browser
AA seq
401 aa
AA seq
DB search
MKLKKFSVSSLTNYIKVSLESDILLSNVSVSGEVSNYKKHSNGNVYFSLKDNECKINCVM
FGKYMEEIDFVDFNDGEKIDILGKISLYGKEGTYQLICYMVEKQGVGDLHKEFEKLKEKL
REKGYFDESNKKQIPSFSFNIGIITSKTGAVIQDILNVAKRKNPFINIKVFDSLVQGPEA
YKDIIQGIRYFNIENNVDVIIIARGGGSIEDLWAFNNEVLAEEIYKSKIPIVSGVGHETD
FTICDFVSDLRASTPTASADICIPDMDSILFLIDSARDSLNKSIDRAIGNFKNRVYEHKM
SISSYSPKKILNEKLIKINNVSLSLNKKMKDSIMKFKDQFSELRLKLEKNDINQILDKGF
VLVCDENLNIIRDPKNINQENDISLMFKDEIIKGKFIKKEV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaaaaatttagtgtttcatctttgacaaattatataaaagttagtcttgaa
agtgatattcttctttcaaatgtaagtgtaagcggagaagtttctaactataaaaaacat
tctaatggcaatgtatatttttctcttaaggataatgaatgtaaaattaactgtgtaatg
tttgggaaatacatggaagaaattgattttgtagattttaatgatggagaaaaaattgat
atattagggaaaatatctctgtatggcaaagagggaacatatcaactcatttgttatatg
gtagaaaaacaaggtgttggagatttacataaagaatttgaaaagcttaaggaaaaactt
agagagaagggatattttgatgaatcaaacaagaaacagatcccttctttttcgtttaat
atagggattataacttcaaagactggagcagtaatacaagatattttaaatgttgcaaag
agaaagaatccgtttatcaatataaaagtttttgattcacttgttcagggtccagaggct
tataaagatataatacaaggtattaggtattttaatatagaaaataatgttgatgtaata
ataatcgcaagaggtggaggatctatagaagatctttgggcttttaataatgaagtttta
gctgaagagatttataaatcaaagatacctatagtaagtggagttggtcacgaaacagat
tttactatttgtgattttgttagtgatttgagagcatctactcctactgcatctgcagat
atatgtatacctgatatggattctattttgtttttaattgatagtgcaagagatagttta
aataaaagtattgatagggctattggaaattttaaaaatagagtttatgagcataagatg
agcataagttcctactcccctaaaaagattttaaatgagaagttgattaaaattaacaat
gtgtcgctatctttaaataagaaaatgaaagattcaattatgaaatttaaagatcagttt
agtgaattaagattaaaacttgagaaaaatgatataaatcaaatacttgataaaggtttt
gttttggtttgcgatgaaaatttaaatataattagagatccaaaaaatataaatcaagag
aatgatatttcacttatgtttaaagatgaaattataaaaggaaaatttattaaaaaggag
gtttag
DBGET
integrated database retrieval system
