Aggregatibacter segnis: NCTC10977_01495
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Entry
NCTC10977_01495 CDS
T06075
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10977_01495 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_01495 (recD)
Enzymes [BR:
aseg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10977_01495 (recD)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10977_01495 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_16
ResIII
RecD_N
DEAD
AAA_7
TrwB_AAD_bind
NTPase_1
PhoH
UvrD_C
T2SSE
AAA_24
NACHT
ATPase
AAA
AAA_33
G-alpha
SRP54
BBS2_Mid
AAA_28
Flavi_DEAD
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
SQH64946
LinkDB
All DBs
Position
1:complement(1531232..1533211)
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AA seq
659 aa
AA seq
DB search
MLTLLSQLKEKGIINAADYYFAEFIHRKQQPFNYAPSVQNLAVLMAALCNFNYRQGNTCL
LLNQSTEQDLFGLQDYFNERIYLTEIQQKIDYLPISQWLSTLQKVQHIAFTDSPLQQIAP
LVLQFNCLYFYRVWQDEFRIADYFKSAVCFEPVFSTEQLSQIASILDRYFQEEQGIDWQK
IAVAMALRQRFCLITGGPGTGKTTTVTKLLLTLQELYQNDLRIKLVAPTGKAAARLTESI
VDAVERLKQTFAQEPNKREIIENLQIPMNAETIHRLLGVRFFSEETRYHADNPLPLDVLV
VDEASMIDLTLMAKLLNALKPETKLILLGDKDQLASVEAGAILGELGRFVNAAKPTYSSS
MAQYLQATTGMTLPSEDKVNAISDSICYLQVSRRFGANPEVGELATTVNLGNAAKSWQLL
QQYQQHQDKHCGVYLTDFAHYLSNKDDVQQRKACVKLIVDRAAEEYARYLQQIPSDGVLQ
EDKVRSIFAAFNHIRFLTALRVGEFGVEQLNLAIAEKLRQKRLLQFHQEREWYIGKPIMV
TQNDSGVGLYNGDIGIYLEHGRVWFEQGQNSYKKVLASRVPNHETAFVMTVHKSQGSEFP
HTFLILPLENSPVLSKELVYTGITRTKDFLTVFALQSVWESAVKNPVQRQSGLGQLLEE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttaactttattatctcaactcaaagaaaaaggcattattaacgccgccgactattat
tttgccgagtttattcatcgtaaacagcaaccgtttaattatgcgccatctgtgcaaaac
ttggcggtgttgatggcggcattgtgtaatttcaattatcgccaaggcaacacctgcctt
ctgttaaatcagtccaccgaacaggatttattcggtttacaggattatttcaacgaacgt
atttatttgacggaaattcagcaaaaaattgattatttgccgatttcacaatggctatct
accttgcaaaaggtacaacacatcgcctttactgattcgccattacagcaaattgcgcct
ttggtgttgcagtttaattgtttgtatttttatcgcgtgtggcaagacgaatttcggatt
gccgattactttaaaagtgcggtctgttttgagcctgttttttcaaccgagcaactctca
caaattgcctcgattctcgatcgctattttcaggaagagcagggcattgattggcagaaa
atcgctgttgccatggcgttacgtcagcgtttttgtttaattaccggcgggccgggaacg
gggaaaacaacaaccgtaaccaagttgcttttaaccttgcaagaactgtatcaaaacgat
ttgcgcattaaattggttgcgccaacaggaaaagccgcggcgcgtttaacggaatccatt
gtggatgccgtggaacgtttaaaacagacatttgcacaggagccaaataagcgggaaatt
atcgagaatctgcaaattccgatgaacgcagaaacgatccatcgtttgcttggtgtgcgt
tttttcagtgaagaaacccgttatcacgcggacaatccattgccgttggatgtgttagtg
gtggatgaggcgtccatgatcgatctcaccttaatggctaaattgcttaatgcgctcaaa
ccggaaaccaaactgattttattgggtgataaagaccaacttgcttccgtagaggccggt
gctattttgggcgaattagggcgttttgtgaatgcggcaaaaccgacatacagctcgtcc
atggcgcaatatttacaggcaacaacagggatgacattgccatcagaagataaggtaaac
gccattagcgacagtatttgttatttacaagtcagtcgccgttttggggcgaatccggaa
gtgggtgagttggcaacgacagtgaatttaggcaatgcggccaagagttggcagttattg
caacaatatcagcaacatcaagataagcattgtggtgtgtacttaacggattttgcgcat
tatttgagtaataaagacgacgtgcaacagcgtaaagcttgtgtgaaattgattgtcgat
cgtgccgcggaagaatacgcgcgctatttgcaacaaattccgtctgatggcgttcttcag
gaagataaagtgcggtcaatttttgctgcgtttaatcatatccgttttttaaccgcatta
cgcgtaggggagtttggtgtcgagcagttaaatttggctatcgcggaaaaattacgccaa
aaacggttgttacaatttcatcaggaacgggaatggtatatcggcaagccgattatggtg
actcaaaatgacagcggagtcggcttgtataacggcgacatcggcatttatttagagcat
gggcgcgtgtggtttgaacaaggacaaaatagctacaaaaaggtgttggctagtcgcgta
ccgaatcatgagactgcctttgtcatgaccgtgcataaatctcaaggctccgagtttcca
catacgttcttgattttaccgttggagaatagcccggttttatccaaagagctggtttac
acgggaatcacccgcaccaaagatttcctcacggtatttgcgttgcaaagcgtatgggaa
agtgcggtgaaaaatccggtacaacgtcaaagcggattagggcagttattagaagaataa
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