KEGG   Alkalimarinus sediminis: NNL22_10130
Entry
NNL22_10130       CDS       T08621                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
asem  Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:asem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:asem02044]
    NNL22_10130 (tssC)
Secretion system [BR:asem02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NNL22_10130 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF2884
Other DBs
NCBI-ProteinID: UZW73408
UniProt: A0A9E8HEZ3
LinkDB
Position
complement(2284360..2285847)
AA seq 495 aa
MSNYERMLATGNRAVELEESSLLDQIVQQTKMQPTDDGYDVAKRGVGAFIAELLSDDNRE
ERVNKNLIDRMIAELDSKLSQQVDEVLHHKEFQKLESAWRGLKLLVDRTDFTQNIRISLL
NVSKEDLYEDFEDAPDVTRSGLYKLVYSSEYGQFGGEPVGGIIANYDLGPGAADMKVMQG
CAAVASMSHAPFIAAAAPKFFGIDSYEELPNLKELHSIFEGPQYAKWQSFRESEDAKYVG
LTAPRFLLRAPYDAENNPVKSFEYNERIDGKHSNYLWGNTAFSFATRLTDSFAKYRWCPN
IVGPRSGGAVEDLPVHHFESLGEIESKIPTEILISDRREFELAEEGFIPLTMRKGSDNAA
FFSANSTMKVKYFGNNEEAKRSELNHRLSTQLPYMFIINRLAHYLKVLQRENIGSWKERT
DIENELNVWISNYIADQENPSAEVRSQRPLRAAKVTVNEVEGQPGIYKIGLSVRPHFKYM
GADFELSLVGKLEKS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtctaactacgaaaggatgttagccactggtaaccgtgctgttgagctagaagagagt
tcgctactcgaccagatagtgcaacaaacaaaaatgcagccaaccgatgacggttatgat
gttgcaaagcgcggtgtaggcgcttttatcgctgagctgttaagcgatgataatagagaa
gaacgcgtcaacaaaaacctgattgatagaatgattgctgagttggactctaagttaagt
cagcaagtggatgaagtgctacaccacaaagagttccaaaaacttgagtccgcctggcgt
gggttaaagttattggtagatcgtactgacttcacccaaaatattagaatatcactgtta
aatgtatcaaaagaagacctatatgaggactttgaagatgctcccgatgtaactcgttct
ggactatataagcttgtttacagcagtgaatacggccagtttggtggtgagcctgtcggc
ggtattattgccaattatgacctaggtcctggcgctgctgatatgaaagtaatgcagggg
tgtgcggctgtagcgtctatgtcccacgcgccatttattgcggccgcagcacctaagttt
tttggtattgatagctatgaagaattaccgaacctaaaagagcttcactcgatattcgaa
gggccacaatatgctaaatggcagagctttagagagtctgaagatgctaagtatgtaggg
ttaacagcgccgcgctttcttttacgagccccttatgatgctgaaaataacccggtcaaa
tcatttgaatataacgagcgtattgatggtaagcactcaaattacttatggggtaataca
gccttttcgtttgcgacacgattaactgacagcttcgccaagtatcgctggtgccctaac
attgtcgggcctcgcagtggaggagcggttgaagacctgccggttcatcactttgagtcc
ttgggtgaaatagaatctaaaattccgacagaaattcttatctctgatcgacgtgagttt
gagctagctgaagaaggctttatcccgctaactatgagaaaaggcagtgataacgccgcg
ttcttttcggccaactcaaccatgaaggtaaaatactttggtaataatgaagaggctaag
cgcagcgagttaaatcatcgcttgagtactcagttaccttatatgtttatcatcaaccga
ctggctcactaccttaaagtgctgcaaagagaaaatattggtagttggaaagagcggacg
gatatcgagaatgagctaaatgtttggattagtaattatatcgcagaccaagaaaaccca
agtgcagaggttcgcagtcagcgtccattgcgagcagcaaaggttaccgttaacgaagtt
gaaggccaacctggtatctataaaatcggtttaagtgttagaccgcacttcaaatatatg
ggggcagattttgagttgtccttggtcgggaagttagaaaagtcttaa

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