Aeromonas simiae: FE240_00860
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Entry
FE240_00860 CDS
T07073
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
asim
Aeromonas simiae
Pathway
asim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FE240_00860 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asim03400
]
FE240_00860 (recD)
Enzymes [BR:
asim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FE240_00860 (recD)
DNA repair and recombination proteins [BR:
asim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE240_00860 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
SH3_13
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
AAA_16
CbiA
nSTAND3
AAA_28
Mg_chelatase
NTPase_1
UvrD_C
SLFN-g3_helicase
MeaB
T2SSE
RuvB_N
MobB
Motif
Other DBs
NCBI-ProteinID:
QFI53393
UniProt:
A0A5J6WUJ4
LinkDB
All DBs
Position
190179..192227
Genome browser
AA seq
682 aa
AA seq
DB search
MSAPIHSDSPLLTRLRALAEAGRVRQLDLQFARLIESLGGEPELVLAAALACFELGRGHI
CLPLDAIERPFGLDGDERAALLEGVAPLATWPARLAASPLVGDGSHSAPHTPLVLWCGRL
YLTRYHDFERAVAARLRALSARAEFPDIRAALDRLFARDYGRLFAALLPLRTEPTFSVRH
FLEKYLDVVEGAALAWDEIAALLASAQSGAELTPLDTLIPPSACSNGQKLAAATAAGRPF
AVISGGPGTGKTTTVARLLAILVETGLRAGAAPAIRLVAPTGKAAARLTESIGAALGDLP
LSPDVVSAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDVLVVDEASMVDLPMMARLLE
ALPPQARLILLGDKDQLASVEAGAVLADICSFVTQGVSEAQADWLAAQSGYLVAGSAAGA
PVRDSLCLLSKSWRFDERSGIGRLARACNGGDPAAVERVWGEGFTDIALHPWSAERYEAL
IQQAVDGYRPYLAALREGLAPKAVFQAFNGFQILCALREGPFGVEGLNERIEAALNRARL
IAKEGEWYAGRAVMVVQNDHGIGLYNGDMGLCLPDEEGRLKVWFEQADGGVRSLLPSRLP
PHETVFAMTIHKSQGSEFAHTVLVLPDAPSPLLTRELVYTGITRAKARLDLYGDRALLAQ
AVRKKTERYSGLAQRLGLESER
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacccatccattccgatagccccttgctcacccggctgcgcgccctggccgag
gcaggccgcgtgcgccagctcgatctgcaatttgcccgcctgatcgagagcctggggggc
gagccggagctggtgctggccgccgcgctcgcctgcttcgagctgggccgtggccacatc
tgtctgccgctagatgccatcgaacgcccgttcgggctcgacggcgacgagcgcgccgcc
ctgctcgagggggtggcccctttggcgacgtggccggcgcgtctggccgcctcgcccctg
gtgggggacggcagccacagcgccccccacacgccgctggtactctggtgcgggcggctc
tacctgacccgctaccacgacttcgagcgcgcggtggccgcgcgcctgcgtgccctctcg
gcgcgggccgagttccccgacatccgcgccgcgctggatcgcctgtttgcccgcgactac
gggcggctgttcgcggccttattgccccttcgcaccgagccgaccttctcggtgcgccac
ttcctcgagaagtacttggacgtggtcgagggggccgcgcttgcctgggacgagatcgct
gcactgctcgcctcggcccagagcggcgccgagcttacccccctcgataccctgatcccg
ccttcggcctgctccaacggccagaagctcgcggcggccaccgccgccggtcgccccttt
gcggtcatctcgggcggccccggcaccggcaagaccaccacggtggccaggctgcttgcg
atcctagttgagaccgggctgcgggccggggcggcgccggccatccggctggtggccccc
accggcaaggcggcggcgcgactgaccgagagcataggggcggccctcggcgatctgccg
ctgagccccgacgtggtgagcgccatcccgaccgaggcgggcaccctgcaccggctgctc
ggggtgatcccggggcgcagccagttccgccaccacgccggcaaccccctgcatctggac
gtgctggtggtggacgaggcctctatggtggacttgcccatgatggcgcgcctgctcgag
gcgctgccgccgcaggctcgcctgatcttgctcggcgacaaggatcagctcgcctcagtc
gaggccggcgccgtgctggccgatatctgtagcttcgtgacgcagggggtgagcgaggcg
caggccgactggctcgccgcccagagcggctacctggtggccggctcggccgccggcgcc
ccggtgcgcgacagcctctgcctgcttagcaagagctggcgttttgacgagcgctctggc
atcggccggctagcgcgcgcctgcaacggcggcgatccggccgccgtcgagcgggtatgg
ggggaggggtttaccgacatcgccctgcacccctggagcgccgagcgctacgaggcgctg
atccagcaggcggttgatggctatcgcccctatctggcggccctgcgcgaggggctggcg
cccaaggcggtgttccaggccttcaacggctttcagatcctctgcgccctgcgcgagggg
ccgtttggggtcgaggggctcaacgagcgcatcgaggcggcgctcaaccgggcgcggctg
atcgccaaagagggggagtggtacgccgggcgcgccgtcatggtggtgcaaaacgatcac
ggtatcggcctttacaacggcgacatgggcctgtgcctgccggatgaggaggggcgcctc
aaggtgtggttcgagcaggccgacggcggcgtgcgcagcctgctgccgagccgtctgcca
ccccacgagacggtgtttgccatgaccatccacaagtctcaaggctcggagttcgcgcat
accgtgctggtgctgcccgatgcccccagccccctgctgacccgcgagctggtctacacc
ggcatcacccgcgccaaggcccgcctcgatctctacggcgatcgcgccctgctggcacag
gcggtgcgcaaaaagaccgagcgctattcgggattggcgcagaggttggggctggaatct
gagcggtga
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