Actinobacillus succinogenes: Asuc_1400
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Entry
Asuc_1400 CDS
T00558
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Asuc_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_1400
Enzymes [BR:
asu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Asuc_1400
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Asuc_1400
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asuc_1400
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asuc_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Vps5
Motif
Other DBs
NCBI-ProteinID:
ABR74759
UniProt:
A6VP62
LinkDB
All DBs
Position
complement(1556713..1558128)
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AA seq
471 aa
AA seq
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MNDFSFFIYDYESFGINPATDRPAQFAGIRTDADFNVIGEPVMLYCKQTNDYLPSPEAVL
VTGITPQECNEKGLPEPEFAASVLAEFSRPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYE
YSWKNGNSRWDLLDIVRACYALRPEGIEWAYDDDGMPSFRLERLTEANGIAHENAHDAMS
DVYATIAMAKLIKRKQPKLFQYFFENRGKREIEHLINVADMTPLVHVSGMLGNYRGNCTL
VAPVGWHPVNQNAVIVCDLSQNIDDLLTKSIEELRTALYTKKTDLAAQGQLPVPLKLVHI
NKCPILAPANTLLPENAERLGIDRQFCSENLQKLRQSFEVRSKIEEIFREEHRFEPSDNV
EIELYSGFFSNNDKNNLAILRQLPIEKLAEHGLTFEDKRIPDLIFHYRARHFFKTLTRTE
QLQWEKYRRRKLEKEATDFEQRMQNLVMEYGDFEDKLNLLHQVYAYASNLL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttagctttttcatttacgactacgaaagtttcggaattaacccggcaacc
gatcgtccggcacaatttgcgggtattcgtactgatgccgatttcaatgttatcggcgaa
ccggtgatgttgtattgcaaacaaaccaacgattatttaccttcgccggaagccgtcctg
gttaccggtattactccgcaggaatgtaatgaaaaaggtttaccggaaccggaatttgcc
gcttccgtactggcggaattcagccgacctaatacctgtgtgatgggctataacaacatt
cgttatgacgatgaaatgacgcgttataccttttaccgtaatttcatcgatccctatgag
tacagttggaaaaacggtaattcccgctgggatttattggatatcgtgcgcgcctgttac
gctttacgtccggaaggcattgaatgggcgtatgatgatgacggtatgccgagttttcgt
ctggaaagactgacggaagctaatggcattgcccatgaaaacgcccatgatgccatgtcg
gacgtatacgctaccattgctatggccaaattaattaaacggaaacagcctaaattattt
cagtatttctttgaaaatcgcggtaaacgggaaatcgaacatcttattaatgtggcggac
atgacaccgttggtgcatgtctcgggtatgctggggaattatcgcggaaactgtactttg
gtggccccggtcggttggcatccggtgaatcaaaatgccgtgattgtttgcgatttaagc
cagaatatcgacgatttactgacgaaaagtatagaagaattacggactgcgttatacacc
aaaaaaacggatttagcggcgcaaggccaattgccggtaccgttaaaactggtacacatc
aataaatgtccgattctggcaccggcgaacaccctgttgccggaaaacgccgagcgcttg
ggaattgatcgtcaattttgttcggaaaacctgcaaaaattgcgtcaatcctttgaagtg
cggtcaaaaattgaagagatttttcgggaagaacatcggtttgaaccgagtgataatgta
gagatcgaattatacagcggttttttcagtaataacgataaaaataatttagctattttg
cgccaattaccgatagaaaaattagccgagcacgggttaacttttgaagataaacggatt
cccgatttaattttccattatcgcgcccgtcattttttcaaaactctcacccgtaccgaa
cagttgcaatgggaaaaatatcgtcggcgaaaattagaaaaagaggcaacggattttgaa
caacgaatgcaaaatctggtgatggaatatggcgattttgaagacaaactaaacctattg
catcaggtttatgcttacgcctccaacttgttgtag
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