Atlantibacter subterranea: NLZ15_08215
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Entry
NLZ15_08215 CDS
T08300
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
asub
Atlantibacter subterranea
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_08215
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NLZ15_08215
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
UTJ48976
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Position
1744265..1744732
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AA seq
155 aa
AA seq
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MADVHSKAIRSKNMRAIATRDTAIEKRLAPLLTAMGFDWRAQDAALAGKPDFVIEAYRCV
IFTHGCFWHHHDCYLFKVPATRTDFWMTKINSNVERDKRDVGRLRAEGWRVLIIWECALR
GRSKLSDEALCERVEEWVCGGGDCAEIDLQGIHAL
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtccacagcaaggcgatacgcagcaaaaacatgcgggcgattgcaacacgc
gacaccgccattgagaaacgcctcgcgccgctactcaccgccatgggctttgactggcgg
gcgcaggatgcggcccttgccggcaagcccgacttcgtgattgaggcgtaccgctgcgtt
atcttcactcacggctgtttctggcatcatcacgactgctatctgtttaaagtgcccgcc
acgcgtaccgacttctggatgaccaaaattaacagcaacgttgagcgggataagcgcgac
gtcgggcggctgcgggcggaaggctggcgggtgctgattatctgggaatgcgcgctgcgt
ggccggagcaaactgtccgacgaggcgttgtgcgagcgggtagaagaatgggtatgcggc
ggaggcgactgcgccgaaatcgatctacagggcatccatgccctgtag
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